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ENZYME STRUCTURE
Cofactor: komponen non protein untuk membantu aktivitas enzim (beberapa berupa ion anorganik) Kofaktor berupa ion organik disebut coenzym Apoenzyme or apoprotein: Enzim yg memerlukan kofaktor tetapi tidak memilikinya.(Enzim tanpa kofaktor) Hanya tersusun dari protein,Ex. Pepsin Simple enzym.
PROSTETIC GROUP
Molekul non-protein yg diikat enzim untuk melakukan fungsinya. ex,. katalase
Prostetics Group
COFACTORS
COENZYMES
Such as the metal ions Mg2+, Cu+, Mn2+ or iron-sulfur clusters Inorganic
Senyawa organik Contoh: NADH Dilepaskan dari sisi aktif saat bereaksi
Coenzymes are small organic molecules that transport chemical groups from one enzyme to another
Holoenzyme
Apoenzim yang dilengkapi kofaktornya
The active site Is the region on the enzyme where the substrate binds
Substate
Active site
Enzyme
Figure 8.16
(a)
Merupakan bagian kecil dari enzim Sisi aktif merupakan suatu cekukan yang bersifat 3 dimensi. memberikan lingkungan mikro yg sesuai untuk terjadinya suatu reaksi kimia substrat terikat pada sisi aktif dengan interaksi / ikatan yang lemah. Spesifitas enzim dipengaruhi oleh asam amino yg menyusun sisi aktif suatu enzim
Sisi aktif mengubah konformasi (bentuknya) agar cocok dengan bentuk substratnya. Mempertimbangkan fleksibilitas protein
Both the enzyme and the substrate possess specific complementary geometric shapes that fit exactly into one and other.(Bentuk sisi aktif enzim pas dg bentuk substrat.)
1 Substrates enter active site; enzyme changes shape so its active site embraces the substrates (induced fit).
Substrates
Enzyme-substrate complex
Figure 8.17
Konsentrasi Enzim
Kecepatan reaksi dipengaruhi oleh konsentrasi enzim, makin besar konsentrasi enzim makin tinggi pula kecepatan reaksi Konsentrasi enzim berbanding lurus dengan kecepatan reaksi
Concentration of Enzyme
Concentration of Substrate
Peningkatan konsentransi substrat dapat meningkatkan kecepatan reaksi bila jumlah enzim tetap. Namun pada saat sisi aktif semua enzim berikatan dengan substrat, penambahan substrat tidak dapat meningkatkan kecepatan reaksi enzim selanjutnya.
Concentration of Substrate
Each enzyme
Has an optimal temperature in which it can function
Optimal temperature for typical human enzyme Rate of reaction Optimal temperature for enzyme of thermophilic (heat-tolerant) bacteria
100
Figure 8.18
Figure 8.18
Gerry, aryo, hafiz: ATP (pengertian,struktur, fungsi dalam metabolisme) Adi,azhar,rafif: metabolic reaction (hydrolysis,condensation,) Rilo,tegar,novrian: OxidasiReduction Ihsan,pinayungan,vlady: Transphosphorylation Bagus,thareq,raka : Coenzym Nadzir,ghazali,iqbal: other metabolic reaction (salah satunya:
Azka dewa, dhito,kharist: ATP (pengertian,struktur, fungsi dalam metabolisme) Insan, reynaldy,roni: metabolic reaction (hydrolysis,condensation,) Refta, barkah, alfin: metabolic reaction (Oxidasi-Reduction) Ivan, frans,Faiz: metabolic reaction (Transphosphorylation) Novan,Alan, Reyshaldy: Coenzym Parama, Shiosi, Azka Hanif: other metabolic reaction (salah satunya:
Enzyme
(a) Normal binding A competitive inhibitor mimics the substrate, competing for the active site.
Competitive inhibitor
Figure 8.19
INHIBITOR KOMPETITIF
Molekul penghambat yang strukturnya mirip substrat, sehingga molekul tersebut berkompetisi dengan substrat untuk bergabung pada sisi aktif enzim.
Contoh : sianida bersaing dengan oksigen untuk mendapatkan Hemoglobin pada rantai akhir respirasi.
Inhibitor kompetititf dapat diatasi dengan penambahan konsentrasi substrat.
Noncompetitive inhibitors
Bind to another part of an enzyme, changing the function
A noncompetitive inhibitor binds to the enzyme away from the active site, altering the conformation of the enzyme so that its active site no longer functions. Noncompetitive inhibitor
Aktivator Enzim
Molekul atau ion yang meningkatkan aktifitas enzim. Yaitu: Kofaktor atau koenzim
ENRICHMENT (PENGAYAAN)
Allosteric regulation
Is the term used to describe any case in which a proteins function at one site is affected by binding of a regulatory molecule at another site. (Fungsi protein pada suatu situs yang dipengaruhi oleh molekul yang terikat pada situs lain)
They change shape when regulatory molecules bind to specific sites, affecting function
Allosteric activater Allosteric enyzme Active site stabilizes active from with four subunits(one of four)
Oscillation
Figure 8.20
NonInhibitor Stabilized inactive Inactive form functional form active site (a) Allosteric activators and inhibitors. In the cell, activators and inhibitors dissociate when at low concentrations. The enzyme can then oscillate again.
Cooperativity
Is a form of allosteric regulation that can amplify enzyme activity (menguatkan aktivitas enzim)
Binding of one substrate molecule to active site of one subunit locks all subunits in active conformation.
Substrate
Inactive form
(b) Cooperativity: another type of allosteric activation. Note that the inactive form shown on the left oscillates back and forth with the active form when the active form is not stabilized by substrate. Figure 8.20
Feedback Inhibition
In feedback inhibition
The end product of a metabolic pathway shuts down the pathway
Feedback inhibition
Active site available Initial substrate (threonine) Threonine in active site Enzyme 1 (threonine deaminase) Intermediate A Feedback inhibition Active site of Enzyme 2 enzyme 1 no longer binds threonine; Intermediate B pathway is Enzyme 3 switched off
Intermediate C
Isoleucine binds to allosteric site Enzyme 4
Intermediate D
Enzyme 5
Figure 8.21