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Barbara Karczeski, MS DNA Diagnostic Lab Board Review Lecture Series 2007
Agenda
Brief overview of hemoglobin The globin genes The Thalassemias Structural hemoglobinopathies Testing
Hemoglobin
Delivers oxygen to the cells Tetramer (4 subunits 2 A and 2 B) plus Heme groups A = Alpha like genes and pseudogenes (Chromosome 16); , , B = Beta like genes and pseudo genes (Chromosome 11); ,,,
Hemoglobin structure
A B
B A
heme
Heme
Globin
Components 22 22 22 22 22
Gower 2
Abnormal H Barts
22
4 4
B A
HbA 98%
HbF ~1%
HbA2 <3.5%
Hemoglobinopathy
definition
An inherited mutation of the globin genes leading to a quantitative or qualitative abnormality of globin synthesis
Thalassemia - Defined
A family of genetic anemias characterized by a reduced rate of production of 1 or more globin subunits of hemoglobin (Hb) Symptoms are caused by the deleterious effects of the normally produced subunits that are now in excess
Abnormal globin protein that is produced at a normal rate, with varying consequences Oxygen affinity, stability and function
Normal
Normal
Thalassemia
Normal
Structural Variant
- and -thalassemia
Alpha Thalassemia Deletions of alphaglobin gene(s) Symptoms can begin in fetal life Complicated inheritance 4 alpha genes
Beta Thalassemia Nonsense, splice and frameshift mutations in beta-globin gene Symptoms begin in infancy/childhood Simple AR inheritance; genotype-phenotype correlation
Structural Variants
Missense mutations in any globin gene that cause amino acid substitutions Symptoms begin in childhood Simple AR inheritance, though the sheer number of possible combinations makes it a more complex issue.
Some terminology
Thal minor and Thal trait carrier state; generally asymptomatic Thal major affected, full blown disease Thal intermedia somewhere in between stay tuned
Beta Thalassemia
-thalassemia
One of the most common single gene disorders in the world Occurs worldwide, but more common in SE Asia, Mediterranean, India, Central/Northern regions of Africa, Middle East, Caribbean Carrier frequencies 1/100 to 1/2 Worldwide frequency: 1-2%
Pathophysiology
Excess alpha chains precipitate and form inclusion bodies that associate with the RBC cell membrane Cause membrane damage and shortened cell survival Large scale destruction of precursor cells in bone marrow Decreased B production causes increased production and an elevated A2 (22)
Normal
Carrier
Affected
Specific B-globin mutations inherited Co-inheritance of alpha thalassemia Fetal hemoglobin production
Generally asymptomatic May have mild anemia (weakness, pallor, mild unexplained fever) Low MCV (measurement of cell size), elevated A2 Can see some bone marrow changes Anemia worsens during pregnancy
Important for risk assessment and prenatal diagnosis Also important to avoid treating with iron
Failure to thrive Anemia Pallor Feeding difficulties Diarrhea Recurrent infections Abdominal enlargement
Appear prior to age 10 Variable anemia Hepatosplenomegaly Recurrent infections Spontaneous bone fractures Extra-medullary hematopoesis Gallstones Leg ulcers
B-thalassemia Intermedia?
Milder form of B-thal Transfusion requiring (to aid quality of life); not transfusion dependent More likely to have B+ mutations than B0 mutations A clinical classification more than a disease
Treatment
Transfusions of packed RBC as needed (up to every 3-4 weeks) Iron chelation therapy (desferroxamine) Splenectomy Vitamin Supplementation Prevention of Infection Psychosocial issues of chronic disease Bone marrow transplant functions as cure
Treatment - Risks
Blood born infections (HIV, Hepatitis, etc) Transfusion reactions (errors) Failure of compliance with chelation regimen
Usually due to iron overload Liver disease Endocrine dysfunction (diabetes, growth retardation, failure of sexual maturation, Cardiac complications (infections, right sided failure) No direct effect on behavior or intelligence
Mutations cause decreases in chain production, not normal production of abnormal B-globin Nonsense, small insertions; splice mutations Some deletions
B0 No B-globin chains are produced Nonsense - Nt169C>T Frame shifts Nt176delCTTT Destruction of splice site Nt142+1G>A
B+ - some beta chains produced Decreased splice efficiency Nt142+6T>C Cryptic splice site Nt365+654C>T
B+mild subset of B+ with higher rates of Bglobin production Poly A mutation Nt494+110T>C Promoter mutations Nt -88C>T Bsilent - ??, some promoter, deep intronic, 5 or 3 UTR mutations Nt-101C>T, 5UTR+10delT
Alpha Thalassemia
Alpha thalassemia
AA / AA
AA / A AA / - A-/AA-/---/--
Normal
Mild microcytosis (Silent Carrier) Mild microcytosis (Trait or Carrier) (cis vs trans) Hemoglobin H diseaseclinically variable Hydrops Fetalis (Alpha Thal Major)
Since alpha chains are synthesized in fetal life, symptoms of AlphaThalassemia Major begin in fetal life
Death occurs in utero or shortly after delivery About 17% of these fetuses also have developmental abnormalities Maternal complications: anemia, preeclampsia, hemorrhage, sepsis, retained hydropic placenta
Pathophysiology
Excess of Beta chains leads to Hb Barts (gamma 4) and Hb H (beta 4) These Hbs have high O2 affinity and are unstable useless! Lead to early RBC death Hb H precipitates out and damages membranes
Hb H Disease
Presence, in a person more than 6 years old, of significant amount (1-2%) of Hb H Sx variable; but can include acute or chronic microcytic anemia, hepatosplenomegaly, mild bone changes, gallstones, leg ulcers, venous thrombosis, transient aplasia May have Hydrops Fetalis
Management
Hb H Hydrops Fetalis
Blood transfusions, iron chelation may have sequelae of hypoxia (congenital anomalies; developmental delay)
Hb H Disease
Folate supplementation Splenectomy Transfusions as needed
Most common molecular cause is one of several deletions of one or both alpha genes of a chromosome Some point mutations described (Hb Constant Spring) Hb variants of alpha also described
Alpha Deletions
Alpha Deletions
Usually represented as /T
May be more severe than deletional form there is an abnormal product made; can cause more cellular damage Most common is Hb Constant Spring
ATR-16: contiguous gene deletion syndrome, diverse clinical features ATR-X: mutations in an X-linked gene having some regulatory effect on alpha gene expression. Sx include hypotonia, seizures, short stature, skeletal and GU abnormalities, cardiac defects
More than 750 variants described by the late 90s Theoretically, could have multiple missense mutations for every amino acid Alpha chain variants are individually rare or of little clinical consequence
Named for how they migrate on electrophoreses: Hb E Named for place in which they were discovered: Hb Rio Grande Both: Hb D-Iran; Hb D-Ibidan; Hb D-Los Angeles
Some rare, only described in a single family Some very common and occurring at high frequency in certain populations
Hb E in SE Asia Hb S and Hb C in Africa
Hb C
Found mainly in West Africa Lower oxygen affinity than Hb A Crystallizes, reduced deformability of RBC; hemolysis Milder than Hb S
Hb E
The most common Hb variant in the world Nearly exclusively in SE Asia and India Has Beta thal properties (An amino acid substitution AND activates a cryptic splice site) Homozyotes extremely mild Compound het with Beta thal can be very severe
Disorder affecting hemoglobin (HBB gene) Inherited as autosomal recessive pattern Characterized by low number of red blood cells Life span of red blood cell -Normal cells 120 days -Sickle cells 10-15 days Affects millions through the world: Sub-saharan Africa, Spanish speaking region, Mediterranean countries Most common inherited disorder in USA - 70000 to 80000 American 1 in 500 African- American 1 in 1000 to 1400 Hispanic-American
Symptoms of SCD
Hand-foot syndrome Fatigue, paleness, and shortness of breath. Pain that occurs unpredictably in any body organ or joint. Eye problems. Yellowing of skin and eyes. Delayed growth and puberty in children and often a slight build in adults.
Pathophysiology
1.
2.
Deformation of the cell due to the polymerization of hemoglobin in sickle red cells when they release oxygen
Sickle cell
Substitution of valine residue for glutamic acid at position 6 in the beta-subunit of hemoglobin.
HB A
HB S
Adenine
Thymine
Testing
Hemoglobin electrophoresis: Hemoglobin electrophoresis is a test that measures the different types of hemoglobin in the blood. The presence of significant levels of abnormal hemoglobins may indicate:
Hemoglobin C disease Rare hemoglobinopathy Sickle cell anemia
Modulators of SCD
Fetal Hemoglobin
High level of fetal hemoglobin protects the infants during the first year and declines between one and two year of age. Patient with hereditary persistence of fetal hemoglobin (HPFH) have few symptoms. In HPFH, Hb F usually comprise 20% of the hemoglobin in the erythrocytes.
Fetal Hb disrupts the polymerization of dexoxyHb-S
Alpha-thalassemia
The rate of SCA is lower in people who also have two-gene deletion The mechanism by which alpha-thalassemia ameliorates red cell destruction is unknown
Opiates and hydration for painful crises Transfusion for serious manifestations (eg stroke) Bone Marrow Transplantation: can cure Sickle Cell Disease The optimal time of transplantation is during childhood
Treatment
Hydroxyurea: Used mainly to enhance fetal hemoglobin production -Blocks DNA synthesis and cell division by inhibiting ribonucleotide reductase - Induce fetal Hb production -Reduces the number of dense cells and irreversibly sickled cells in the circulation
Experimental Therapies
Erythropoietin: stimulate red cell production and increase Hb F level Clotrimazole: reduces the number of dense cells and the number of irreversibly sickled cells in patients with sickle cell disease Nitric oxide: An inhaled gas that can reduce the polymerization tendency of sickle hemoglobin Gene therapy: replacing the defective gene with a normal one
Heterozygous state for Hb S (Hb AS) No serious clinical consequences Sudden death during intensive training Hematuria, isosthenuria (renal papillary necrosis)
Ethnic Group Mediterranean African American Non-Hispanic Caribbean West African Hispanic Caribbean Mexican/Central Amer. Asian SE Asian India/Pakistan Middle Eastern
Beta Thal 1/20-30 1/75 1/50-75 1/50 1/75 1/30-50 1/50 1/30 1/30-50 1/50
Alpha Thal 1/30-50 t 1/30 t 1/30 t 1/30 t Variable Variable 1/20 c >1/20 c Variable Variable
Ethnic Group Mediterranean African American Non-Hispanic Caribbean West African Hispanic Caribbean Mexican/Central Amer. Asian SE Asian India/Pakistan Middle Eastern
HbS 1/30-50 1/12 1/12 1/6 1/30 1/30-200 Rare Rare 1/50-100 1/50-100
HbC Rare 1/50 1/30 1/20-30 Rare Rare Rare Rare Rare Rare
Ethnic Group Mediterranean African American Non-Hispanic Caribbean West African Hispanic Caribbean Mexican/Central Amer. Asian SE Asian India/Pakistan Middle Eastern
The thalassemias and other hemoglobinopathies are so common that, unless you want to entertain a ridiculously high new mutation rate, there must be some selection for the carrier state The Malaria Hypothesis
When mapped out, the global distribution of malaria and populations with high carrier frequencies for hemoglobinopathies are essentially the same Being a carrier protects you from Malaria so you have an evolutionary advantage over a non-carrier. How does this work? Hasnt been pinned down yet, but theories abound
Hb S reduces oxygen tension in cells retarding growth of the parasite A thal confers susceptibility to a milder form of malaria; once contracted, the patient has immunity to the more severe form and increased survival B-thal - ???; possibly a role in decreasing cell adhesions in the deadly cerebral form of malaria
Screening
CBC to look for MCV (mean corpuscular volume) and MCH (mean corpuscular hemoglobin)
Will be reduced in both thalassemias (microcytic anemia)
Hb Electrophresis to look for A2: Will be elevated in B-thal, normal on Athal. May also be elevated in HbS
Screening
Mutation Identification
Not usually a diagnostic tool. You can narrow down the diagnosis well with non-molecular blood testing, smears, etc. Necessary for prenatal diagnosis Helpful in estimating severity
Other causes of a + carrier screen (low MCV and high A2) Multiple hemoglobinopathies can interact and alter the results of screening; produce lots of undescribed phenotypes Non-classic: B: mutations in LCR, upstream promoter; A: point mutations, novel/rare deletions Other Deletions (thalassemia, Hb Lepore) Dominant B-thal (Irish family) Thal plus structural hemoglobinopathies (HbS, HbC, HbE and any one of the >300 other abnormal Bglobins)