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Classical morphology in zygomycete

taxonomy1
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I Gerald L. Benny

Abstract: Classification of Zygomycetes has evolved with the description of new taxa and the
rediscovery and redescription of known species. Taxonomy of orders in Zygomycetes is based on the
morphology of the spore forming structures, sporangia and (or) sporangiola, or merosporangia. Some
organisms produce only zygospores, azygospores, chlamydospores, or a combination of these structures.
The occurrence and morphology of any of the aforementioned structures and others (e.g., stolons and
rhizoids, apophyses, branching pattern, fertile vesicles) are used to ascertain the phylogenetic
relationships in Mucorales. Our understanding of the morphology, development, and phylogeny of
Zygomycetes has been enhanced by using microscopic observations and cladistic analysis of data sets
derived both from small subunit rDNA and morphology. Many morphological characters (e.g., trophocyst,
yeast cell formation) still appear to be reliable phylogenetic indicators while others (e.g., spore
morphology) are too variable. The value of zygospore morphology is reduced because the sexual spore
has never been reported for many taxa. Many characters used to circumscribe rnucoralean families
probably do not indicate relationships but still are useful in identification. Sporangiola should be
considered indistinct from sporangia.
Key words: cladistics, morphology, Mucorales, phylogeny, sporangia, sporangiola.
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RCsurnC : La classification des zygomycbtes a CvoluC avec la description de nouveaux taxons ainsi que
la redkcouverte et la redescription des espbces connues. La taxonomie des ordres chez les zygomycbtes,
est baste sur la morphologie des structures formant les spores et (ou) les sporangioles, ou sporanges.
Certains organismes produisent seulement des zygospores, des azygospores, ou des chlamydospores, ou
une cornbinaison de ces structures. La presence et la morphologie de chacune des structures
mentionnCes et d'autres (p. ex., stolons et rhizo'ides, apophyses, patron de ramification, vCsicules
fertiles) sont utilisees pour Ctablir les relations phylogCnCtiques chez les mucorales. Notre
comprChension de la morphologie, du dCveloppement, et de la phylogCnie des zygomycktes a it6
amCliorCe par l'utilisation des observations microscopiques et l'analyse cladistique des ensembles de
donnCes obtenues a la fois de la petite sous-unite du rADN et de la morphologie. Plusieurs caractkres
morphologiques (p. ex., trophocyste, formation de cellules levuriformes) apparaissent toujours comme
des indicateurs phylogCnCtiques fiables alors que d'autres (p. ex., morphologie sporale) sont trop
variables. La validit6 de la morphologie des zygospores est rCduite parce que la spore sexuelle n'a
jamais CtC rapportCe chez plusieurs taxons. Plusieurs caractkres utilists pour circonscrire les familles du
mucorales n'indiquent probablernent pas de relations mais demeurent utiles pour l'identification. Les
sporangioles devraient Ctre considCrCs comme des formes indistinctes des sporanges.
Mots clLs : cladistiques, morphologie, mucorales, phylogCnie, sporanges, sporangioles
[Traduit par la rkdaction]

Introduction anamorph. In Zygomycota, there is one notable exception to


using the anamorphic name. Syzygites Ehrenb. :Fr. (Hesseltine
Barr (1992) includes four phyla in Fungi: Ascomycota,
1957) is a mushroom parasite that produces sporangia (ana-
Basidiomycota, Chytridiomycota, and Zygomycota. Unlike
morph genus: Sporodinia Link) and zygospores (teleomorph
the former two phyla in which the names are based on the
genus: Syzygites) on separate hyphae and at different times
characteristics of the teleomorph (Greuter 1988; Article 59.1
in nature.
of the International Code of Biological Nomenclature), in
Zygomycetes, as presently delimited, consist of seven
Chytridiomycota and Zygomycota taxonomy is based on the
orders: Dimargaritales, Endogonales, Entomophthorales,
Glomales, Kickxellales, Mucorales, and Zoopagales (Benjamin

I
Received August 15, 1994. 1979; Benny 1982; Humber 1989; Morton and Benny 1990).
Harpellales, a zygomycete according to Benjamin (1979),
G.L. Benny. Department of Plant Pathology, 1453 Fifield Hall, is included in Trichomycetes (Lichtwardt 1986) and, there-
University of Florida, Gainesville, FL 3261 1-0680, U.S.A. fore, will not be treated further in this discussion. Classifica-
' This paper is Journal Series No. R-04269 of the Florida tion and identification of Zygomycota are based o n (i) the
Agricultural Experiment Station, Gainesville. type of asexual reproductive structures formed (sporangia,
Can. J. Bot. 73(Suppl. 1): S725-S730 (1995). Printed in Canada 1 Imprimt au Canada
Can. J . Bot. Vol. 73 (Suppl. I ) , 1995

sporangiola, merosporangia, chlamydospores, arthrospores, apophysis (vs. no apophysis), (iv) stolons and rhizoids (vs.
and yeast cells); (ii) the branching pattern of aerial hyphae sporophores arising directly from the substrate), (v) branched
(simple, or sympodially, verticillately, or dichotomously sporangiophores (sympodial, verticillate, umbellate, dichoto-
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branched); and (iii) the presence of septa, if formed, and if mous, etc.) (vs. unbranched), (vi) zygosporangial wall orna-
produced their frequency, location, and ultramorphology. mented and pigmented (vs. smooth and more or less hyaline),
Morphology of zygospores, if present, has been consid- and (vii) zygospore suspensors apposed, appendaged, and
ered important at the ordinal level (Benjamin 1979), but also heterogamous (vs. opposed, nonappendaged, and more or
can typify families or genera in Mucorales. Of lesser impor- less equal). Other character states include being a parasite
tance are growth requirements, spore morphology, and size (vs. saprobe), homothallic (vs. heterothallic), unispored spor-
of structures. angiola (vs. multispored), and spinose fertile branches (vs.
The purpose of this paper is to discuss the criteria used in nonspinose).
classification of Zygomycota and to present examples of The taxonomy of Mucorales has evolved with the discovery
those characters and character states in which terminology of new taxa. All structures that can be observed with the light
has changed. microscope were noted by early students of Mucorales. The
structures associated with sporangiospore formation were, and
still are, used to classify members of this order because they
Taxonomy are always present. The production of sterile spines, elaborate
The orders of Zygomycetes have been discussed elsewhere branching, and unispored sporangiola by Chaetocladium and
(Benjamin 1979; Benny 1982). Dimargaritales, Kickxellales, Dichotomocladium resulted in their being placed in a separate
and Zoopagales have changed little in the last 15 years family, Chaetocladiaceae (Benny and Benjamin 1993). Exces-
and excellent descriptions of these orders can be found in sive importance being accordedto a structure, such as the uni-
Benjamin's publications (Benjamin 1958, 1959, 1961, 1963, spored sporangiolum (conidium of some authors), has resulted
1965, 1966, 1979, 1985a, 19856). Changes in the classifi- in the proposal of polyphyletic families (Choanephoraceae
cation of Entomophthorales, since the order was reviewed of Zycha et al. (1969); Cunninghamellaceae of Pidoplichko
by Benjamin (1979) and Tucker (1981), have resulted in a and Mil'ko (1971) and Mil'ko (1974)). The polyphyletic
six-family system (Humber 1989). Six of the endomycor- Mucoraceae and Thamnidiaceae have also been segregated into
For personal use only.

rhizal genera in Endogonales (Gerdemann and Trappe 1974; smaller, supposedly monophyletic families: the ~ u c o r a c e a e
Benjamin 1979), those producing azygospores or chlamydo- into Absidiaceae, Dicranophoraceae, Mucoraceae sensu lato,
spores, were transferred to a new order, Glomales, and the Phycomycetaceae, and Gilbertellaceae (Benny 1991; see Benny
Endogonales emended to contain only the saprobic or ecto- and Benjamin 1993 for the generic distribution (Protomyco-
mycorrhizal genera forming zygospores (Morton and Benny cladus (Schipper and Samson 1994) would be a member of
1990). Here I will concentrate on classification of Mucorales. Absidiaceae)). Two families, Chaetocladiaceae (Benny and
The Mucorales contain fungi that reproduce asexually by Benjamin 1993) and Mycotyphaceae (Benny et al. 1985)
endospores produced by cleavage-plane formation in sporangia have been removed from Thamnidiaceae. These families are
and (or) sporangiola or merosporangia (O'Donnell 1979), based on combinations of characters explained by von Arx
unispored merosporangia (Zheng et al. 1988), and sporan- (1983), Benny et al. (1985), Benny (1991), and Benny and
giola (Benny and Benjamin 1975, 1976; Shipton and Lunn Benjamin (1993).
1980) are also known. Asexual reproduction also may occur The ability to observe small structures, e.g., the discoid
by production of yeast cells, chlamydospores, and arthro- columella of Chaetocladium (Benny and Benjamin 1976),
spores. Sexual reproduction by zygospore formation is known has been facilitated by the availability of better microscope
for many, but not all, taxa. Zygospores usually are rough optics. Transmission electron microscopy has confirmed struc-
walled and dark walled. Suspensors are appendaged in tures demonstrated with the light microscope or has revealed
Phycomyces, Radiomyces, Parasitella, and some species of new processes such as spore ontogeny. Scanning electron
Absidia, but the remaining Mucorales are nonappendaged microscopy (SEM) has been most useful in showing surface
(Zycha et al. 1969). Members of Choanephoraceae (Kirk detail, especially ornamentation of sporangia, sporangiola,
1984) and Pilobolaceae (Grove 1934; Kirk and Benny 1980; merosporangia, and zygosporangia.
Hu et al. 1989) produce zygospores with apposed suspensors Two other methods currently available have recently
below the surface of the substrate whereas most of the other produced very interesting mucoralean phylogenies. Cladistic
taxa form sexual spores at or above the substrate on opposed analysis of comparative sequence analysis of the 18s rDNA,
suspensors. Septa, which are multiperforate, are normally and on morphological data sets, also appear to be two impor-
formed to wall off old or injured hyphae or reproductive tant means of determining phylogeny in Mucorales.
structures. In Sigmoideomycetaceae, however, septa are regu-
larly formed and the fertile hyphae disarticulate at maturity
(Benny et al. 1992). Most members of Mucorales are saprobes
Problems in taxonomy of Mucorales
with a few species being facultative parasites that can be readily Many terms have been in use during the history of studies on
cultured in the laboratory. Sigmoideomycetaceae cannot be Zygomycetes. Some of these have recently been restricted
grown without a host. (sterigma and now pedicel; the structure that supports a
Many of the characters produced by Mucorales are con- sporangiolum) or abandoned (conidium, which was formerly
sidered advanced by Benjamin (1959) and Hesseltine and Ellis used for a unispored sporangiolum). The term stylospore was
(1973) including production of (i) sporangiola (vs. sporangia), in common use in the early literature on Mortierellaceae,
(ii) merosporangia (vs. sporangia or sporangiola), (iii) an especially in descriptions of ort tier el la spp. Stylospore is an
E2.4. Benny

obsolete term for a spore terminating a stalk or hypha, espe- SEM. Natural crystal morphology and distribution, as well
cially a uredospore. In current literature on Mortierellaceae as other surface detail, are probably best observed in fungi
the stylospore is a chlamydospore (Benjamin 1978). that have been air-dried and not critical-point dried before
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In Mortierellaceae, sporangiospores are produced in struc- examination with the SEM.


tures called sporangia even though the columella is extremely Four calcium oxalate crystal types were identified on the
reduced (hemiconvex to flattened and septurnlike). This spor- sporophores and sporangial walls of Gilbertella persicaria
angium may be uni- or multi-spored. Under current definition, (Eddy) Hesseltine (Whitney and Arnott 1986). Aberrant crys-
it might be more appropriate to consider the sporangium of tals can be observed on G. persicaria under some cultural
some, if not all, members of Mortierellaceae a sporangiolum. conditions (Whitney and Arnott 1988). Additional crystal types
The sporangiola of some mucoralean fungi can be almost as were observed on Mucor hiemalis Wehmer and Rhizopus
large as the sporangia, e.g., Pirella circinans Bain. (Benny oryzae Went. & Prinsen Geerl. (Powell and Arnott 1985).
and Schipper 1992). Cole and Samson (1979) and O'Donnell(1979) also show the
Dissophora decumbens Thaxter (19 14) is an example of a presence and distribution of calcium oxalate crystals on
fungus that was not in culture for many years. Dissophora many other members of Mucorales. Distinct sporangiolar
decumbens has always been recognized as a distinct species ornaments have been observed in species of Radiomyces
unlike other members of Mortierellaceae that have been reduced (capitate with a calcium (probably calcium oxalate) crystal
to species of Mortierella. Although he had D. decumbens in in the apex), and Hesseltinella vesiculosa Upadhyay and
culture the fungus died during a collecting trip and, as a Cunninghamella spp. (long needlelike spines with a hexagonal
result, Thaxter was able to provide excellent illustrations of base) (Shipton and Lunn 1980; Benny and Khan 1988). Other
this fungus but an incomplete species description. Nothing was taxa, e.g., Echinosporangium transversale Malloch and
written about the colony appearance or odor (Mortierellaceae Ellisomyces anomalus (Hesseltine & Anderson) Benny &
characteristically produce a wavy or zonate colony and a R.K. Benjamin, have smooth-walled sporangiola (O'Donnell
garlic- or onion-like odor), or the temperature used to culture 1979). A survey of all Mucorales would be necessary to deter-
the fungus (Thaxter 1914). Gams and Carreiro (1989) later mine the taxonomic value of aerial structure ornamentation.
redescribed D. decumbens stating that it had a garliclike Other characters of possible taxonomic importance are the
odor, and an optimal growth temperature of 20°C, and pro- nature and ornamentation of the zygosporangial wall. Schipper
For personal use only.

duced stolons and chlamydospores. The stolons were described et al. (1975) identified four basic zygosporangial ornamenta-
as being vegetative filaments of indeterminate growth by tion types (a, b , c, d ) after their examination of selected
Thaxter (1914). The different terminology used to describe species of Mucor, Zygorhynchus, Parasitella, Rhizomucor,
the Dissophora stolon might also be encountered when com- and also Absidia spinosa Lendner, Phycomyces blakesleeanus
paring the descriptions of other taxa. The chlamydospores of Burgeff, and Syzygites megalocarpus Ehrenb. :Fr. Mucor and
Dissophora were described for the first time by Gams and Zygorhynchus were divided into five groups (A,, A,, B1,
Carreiro (1989). B,, C) based on zygosporangial ornamentation. Von Arx
Differences in the interpretation of species characters must (1983) transferred the Mucor spp. from the Al group (those
be taken into account when reviewing the descriptions of all taxa with sympodial or racemosely branched sporophores,
fungi. The reader can be greatly aided by the presence of sphaeroid or ellipsoid sporangiospores, and zygosporangia
high-quality photographs and (or) drawings, such as those with reddish-brown walls bearing starfishlike ornaments) into
provided by Thaxter for most of the fungi he described. The a new genus, Circinomucor. Zygosporangial ornaments were
publication of new taxa accompanied by poor descriptions recorded for Backusella and additional Mucor species by
and illustrations may cause subsequent workers difficulty in Stalpers and Schipper (1980) and several other genera
identification. Type material is often not available for many including Benjaminiella, Gilbertella, Mycotypha, Rhizopus,
species (never deposited, lost, or cannot be sent out on loan). Syzygites, and Zygorhynchus (O'Donnell et al. 1977, 1978;
Isolates of many classical species of Mucorales have been O'Donnell 1979; Schipper 1984; Benny et al. 1985). The
deposited in culture collections that were derived from the zygosporangial ornaments of the other zygospore-producing
holotype specimen or authenticated by the original author. Mucorales need to be examined before any conclusions can
Study of these cultures may clarify descriptions and (or) be reached regarding the taxonomic value of this character.
illustrations when types are missing. The carbonaceous (dark and relatively opaque, and readily
Historically, the general morphology of asexual and sexual broken) versus the noncarbonaceous (brown to hyaline, trans-
reproductive structures (see the character states listed above) lucent to transparent, and not easily broken) nature of zygo-
of mucoralean fungi have been accurately described, although spores might also be a useful character state. There is very
it is done inconsistently for some characters (e.g., ornamen- little information in the literature regarding this aspect of the
tation of sporangiolar, sporangial, and zygosporangial walls, zygosporangial wall. Zygospores have never been reported
and mode of spore release). Sporangial and sporangiolar for many taxa of Mucorales and, therefore, the value of any
walls have often been said to be encrusted. Presumably these potential character of the zygospore, zygosporangium, and
structures are covered with calcium oxalate crystals. The suspensors is limited.
morphology and distribution of surface structures are well Another problem that can be encountered is the taxon with
illustrated using the SEM (Cole and Samson 1979; O'Donnell highly variable morphology, as has been recently described
1979). The morphology of crystals, however, can be modi- for Umbelopsis nana (Linnemann) von Arx (Kendrick et al.
fied if water stands on the surface (Benny and Khan 1988; 1994). Species variability makes it difficult to determine
Benny and Samson 1989). These crystals might also be washed character states for a particular taxon. Other taxa, e.g.,
away during critical-point drying prior to observation with Cokeromyces recurvatus Poitras and Mycoty~ha africana
Can. J. Bot. Vol. 73 (Suppl. I ) , 1995

Novak & Backus (Benny and Benjamin 1976), are morpho- of Mucorales (O'Donnell and Cigelnik 1994). Other proce-
logically stable. It is important to culture mucoralean fungi dures will certainly become available that will be useful in
under optimal conditions to determine character variability. taxonomic and phylogenetic studies of Mucorales.
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It is often difficult to delimit some character states, such Better resolution of the zygomycete phylogeny presented
as sporangiospore morphology, where the majority of species by O'Donnell and Cigelnik (1994) only can be obtained by
in Mucorales exhibit a range in morphology from globose to adding 18s sequences from additional taxa. These may be
irregular or angular, as seen in Thamnidium elegans Link obtained from existing genera, especially the larger ones (e.g.,
(Benny 1992). Many taxa, however, have spores that are Absidia, Mortierella, Mucor, Rhizopus) or by isolating new
within this range of variation, e.g., globose to ovoid (Circinella taxa from areas and (or) substrates that have not been sampled.
umbellata van Tiegh. & Le Monn.; Hesseltine and Fennel1 The majority of Zygomycetes have been isolated from Europe
1955) or ellipsoid to ovoid spores (7hamnostylumpiriforme and North America (where most of the mycologists reside).
(Bain.) von Arx and Upadhyay (Benny and Benjamin 1975); Few Zygomycetes have been isolated from Africa, South or
Mucor mucedo L. :Fr. (Schipper 1975)). Other characters are Central America, or Australia. Dung and soil have proven
easy to define and are restricted to a few taxa, including spor- to be good sources of Dimargaritales, Kickxellales, and
angiospores with thin hyaline appendages (Choanephoraceae Mucorales, but they may be isolated from other organic sub-
(Blakeslea, Choanephora, Poitrasia), Kirk 1984; Gilbertel- strates (bark, fruits, flowers, etc.). Many new taxa might be
laceae (Gilbertella), Benny 1991) or spiny walls (Sporodiniella found if additional geographic regions were sampled.
umbellata Boedijn ex Evans & Samson and Syzygites megalo- In the preceding discussion, a few of the outstanding
carpus; Ekpo and Young 1979; O'Donnell 1979; Gbaja and problems were listed that can be encountered when studying
Young 1985). the Mucorales or any other fungal group. Luckily, most of
Many other characters need to be explored before we the species in this order can be cultured and, therefore, can
have a definitive phylogeny based on traditional characters, be studied under controlled conditions. The production of
including (i) possible differences in sporangiospore ontogeny, extensive aerial hyphae by most mucoralean fungi, however,
(ii) distribution of chemical compounds, and (iii) search for makes herbarium specimen preparation difficult unless material
zygospores in those taxa where they are unknown at present. is placed in a box or some other method is used to prevent
Chemotaxonomy might prove to be valuable in phylogeny of compression during storage.
For personal use only.

Mucorales. Fatty acid profiles are used in bacterial taxonomy A preliminary cladistic analysis, based on a morphological
and they have been used in Mortierella (Amano et al. 1992). data set, of the same genera of Mucorales sequenced by
Host range of Piptocephalis unispora Benj. has been used O'Donnell and Cigelnik (1994), completed recently by me
to separate Micromucor from the remaining subgenera of needs to be revised before a useful phylogeny can be obtained.
Mom'erella (Gams 1977; Benjamin 1978; Cuthbert and Jeffries This data set was based on the maintenance of the classical
1984). The host range of this and other mucoralean parasites distinction between sporangia and sporangiola. In the result-
might prove to be useful in discriminating other taxa in the ing trees taxa are included in a single clade that only form
order. Antigenic studies have also been used to resolve sporangiola (whether uni- or multi-spored). These taxa are
affinities in Mucorales (De Ruiter et al. 1993). The polyol distributed throughout the order when 18s rDNA sequence
pattern appears to be useful in defining fungal phyla (Pfyffer data is analyzed. The lack of congruence in cladograms derived
et al. 1986). from morphological or molecular data sets indicates that
The accuracy of species descriptions has increased in many of the character states considered advanced in the
direct relationship to the level of technology available to the Mucorales have arisen several times in the order and, there-
individual researcher. When studying Mucorales, or other fore, are not phylogenetically informative. The characters
microfungi, light microscopes (both compound and dissect- (e.g., production of stolons and rhizoids, apophyses, or
ing) are necessary when describing structures and making sporangiola), however, are useful in identification. Certainly,
measurements. Initially, drawings were the optimal method the most important revelation derived from recent molecular
used to illustrate fungi. Improvements in photography have studies is that too much emphasis has been placed on the dis-
replaced drawing as the most popular way to illustrate fungi. tinction between sporangia and sporangiola. It is proposed
Invention of newer light microscopes (phase and interference that sporangiola be treated as small sporangia, often with
phase contrast, fluorescence, etc.) have extended the research distinct wall characteristics.
life of this method of observation. Many Zygomycetes pro-
duce such large fruiting structures that is not possible to illus- Acknowledgements
trate them photographically using a light microscope. I thank Drs. J.W. Kimbrough, H.C. Kistler, and L. Meinhardt
Electron microscopy has facilitated the observation of for reviewing the manuscript.
structures barely visible or invisible with the compound light
microscope. The extreme depth of field provided by the SEM References
permits observation of surface detail (O'Donnell 1979) or
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Amachi, T. 1992. Chemotaxonomic significance of fatty acid
(see Benny et al. 1992, Fig. 20). Transmission electron micro- composition in the genus Mortierella (Zygomycetes,
scopy can be used to clarify details of structures originally Mortierellaceae). Mycotaxon, 44: 257-265.
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Currently, sequence comparison of 18s or the 5' end of Benjamin, R.K. 1958. Sexuality in the Kickxellaceae. Aliso, 4:
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