Professional Documents
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User Guide
5180542-100
Revision 3
Do not duplicate
Copyright 2007
by General Electric Company inc. All rights reserved.
User Guide
REGULATORY REQUIREMENTS
• Council Directive 93/42/EEC concerning medical devices: the label affixed to the product testifies
compliance to the Directive.
European registered place of business:
GE Medical Systems SCS
Quality Assurance Manager
BP 34
F 78533 BUC CEDEX France
Tel: +33 (0)1 30 70 40 40
• Medical Device Good Manufacturing Practice Manual issued by the FDA (Food and Drug Administration,
Department of Health, USA). CardIQ Xpress approved by FDA under k number K041267.
• Underwriters' Laboratories, Inc. (UL), an independent testing laboratory.
• Canadian Standards Association (CSA).
• International Electrotechnical Commission (IEC), international standards organization, when applicable.
• USA/HHS:
United States Federal law restricts this product to use by or on the order of a physician.
CAUTION
CardIQ Xpress is an optional software extension of the Volume Viewer 3 application for
Advantage Workstation (AW) systems.
It provides you with a number of functions for the analysis and review of CT cardiac exams, in
the form of a set of "CardIQ Xpress" protocols available within the AW Volume Viewer 3
application.
The protocols can be used with both single-phase and multi-phase datasets.
CardIQ Xpress comprises four main categories of protocols:
-Vessel Analysis protocols for analysis of the coronary vessels,
-Ejection Fraction protocol for computation of the left ventricle ejection fraction,
-Volume Rendering protocols for global review of the cardiac anatomy,
-Batch protocol to prescribe batch series of short and long axis views of the heart.
This manual describes the CardIQ Xpress options. For information concerning the Volume
Viewer 3 application, refer to the Volume Viewer 3 user documentation.
This chapter contains the system requirements, an overview of the functions available in CardIQ
Xpress, a brief summary of the contents of the manual, and a list of typographical conventions
used.
1 INTRODUCTION
CardIQ Xpress is an optional software extension of the AW Volume Viewer 3 application on Advantage
Workstation (AW) systems, in the form of new CardIQ Xpress protocols available within the Volume Viewer 3
application.
This manual is a supplement to the Volume Viewer 3 user guide and describes only the use of the CardIQ Xpress
option.
For all information concerning the use and functions of the Volume Viewer 3 application itself, refer to the Volume
Viewer 3 user documentation.
2 SYSTEM REQUIREMENTS
The CardIQ Xpress option can be installed on any AW workstation that already has the AW Basic Display and
AW Volume Viewer 3 software installed.
Note: The Volume Viewer 3 application requires an AW workstation equipped with at least 256 Megabytes of
memory (RAM), and with AW Basic Display software version AW4.4 or later.
Note: For loading multi-phase datasets a minimum of 1 Gigabyte of memory is highly recommended.
CardIQ CardIQ
CardIQ Xpress protocols Xpress Xpress
Plus Pro
Reformat X X
Heart X X
Heart Graft X X
Phase Registration X X
Cardiac X X
Angiographic View X X
Coronary X X
Left Coronary X X
Right Coronary X X
TreeVR X X
Cardiac Reformat X X
Cardiac Transparency X
Ejection Fraction X
CardIQ CardIQ
CardIQ Xpress features Xpress Xpress
Plus Pro
3DPOS Active Annotation X X
Cardiac filters X X
Oblique Review X X
Phase Drop X X
Review Steps X X
Save State X X
AVA Layouts X X
Layout Customization X X
Color Identification X
Reporting X
5 FUNCTIONS
Note: For protocol applicability, check the table in the CardIQ Xpress options section of Chapter 1.
Overview
CardIQ Xpress consists of a set of protocols for the analysis and review of CT cardiac exams, for both single-
phase and multi-phase datasets.
The Vessel Analysis protocols (Left Coronary, Right Coronary, Coronary, Tree VR and Angiographic View)
allow you to perform a detailed review and quantitative analysis of the coronary vessels. Each protocol contains
the successive steps required to perform an analysis: vessel selection, vessel identification and quantification,
selection of sections of interest (measurement points), adding quick measurements, report review, and filming or
saving of the report. These protocols extract the aorta and coronary vessel tree structure from the surrounding
tissue, allowing them to be viewed in isolation.
Pre-defined protocols are supplied for the analysis of the left and right coronary artery. Use these as supplied or
modify them to create new custom protocols to meet specific requirements.
The Ejection Fraction protocol has been developed to provide a simplified workflow for a quick computation of
the left ventricle ejection fraction.
The Volume Rendering protocols (presets) (Cardiac) allow you to obtain a global view of the cardiac region and
to examine overall spatial relationships. Heart, Heart Graft and Cardiac Transparency protocols display VR
views of the heart without surrounding anatomy.
Functions
• The user identifies the branches of the vessel to be analyzed by marking points inside the vessel (start of
section, end of each branch, and intermediate points if required).
• The software then automatically detects the vessel centerline for each branch and computes cross section area
and mean diameter at each point.
• Using the "Lumen" view together with curved and oblique reformatted views (see next page) the user can now
interactively explore the anatomical context, and if necessary edit the results from the automatic centerline and
cross section computation.
Computed vessel dimensions (diameter, cross section area) are displayed as a curve in the Lumen view, and
the corresponding numerical values can be read at any given point by moving a cursor line.
All other Volume Viewer 3 view types are also available during vessel analysis.
• To produce a report, the user marks significant points on the views, such as start and end of an aneurysm or
stenosis, position of supplied/supplying vessels, bifurcations, etc.
The report will contain both the measurement values concerning these points and a full set of correlated
images (curved and oblique views). Automatic measurements computed by the software and manual
measurements performed by the user can be included.
Once the user has marked the measurement points, the report is generated automatically by the software.
Reports can be filmed and/or saved on the workstation.
Views
CardIQ Vessel Analysis uses three specific view types:
- The "Lumen" view shows the complete length of the selected vessel, "unfolded" along the centerline,
- The oblique cross section view (X-section) shows a true cross section of the vessel (perpendicular to the
centerline) at any given point,
- The oblique longitudinal section view (L-section) shows a longitudinal section of the vessel (parallel to the
centerline) at any given point.
CardIQ Vessel Analysis also generates a curved reformatted view that uses the centerline as the reference trace.
Oblique X-section and L-section views can be positioned interactively at any point along the centerline using the
3D cursor. The Lumen, oblique L-section and curved views can all be rotated interactively. A "best" oblique
L-section can also be displayed that is rotated automatically to show as much of the vessel as possible (plane of
maximum curvature).
These functions allow you to rapidly and completely explore the anatomical context (lesions, calcifications,
branches, nearby anatomy).
Ejection Fraction
The Ejection Fraction protocol has been developped for rapid, consistent and repeatable computation of left
ventricle ejection fraction.
The Ejection Fraction protocol workflow is structured as follows:
• The user checks the consistency of automatic cardiac orientations and ajusts them if necessary,
• The user scrolls through the phases to select end systolic and end diastolic phases,
• The user places the cursor on the mitral valve using the 4-chamber long axis view for reference, for both
phases,
• The software then automatically extracts the left ventricle and removes papillary muscles for both phases. The
user has the ability to adjust and edit the left ventricle segmentation on the 3D view,
• The software then automatically computes heart functional parameters such as ejection fraction, stroke volume
and volumes for both phases.
Volume Rendering
CardIQ Xpress is supplied with a set of optimized protocols for cardiac image review (Cardiac, Heart, Heart Graft
and Cardiac Transparency).
Use these to obtain a global view of the cardiac region, to examine the overall spatial relations and those parts of
the vasculature located on the outside of the region.
Volume rendering (VR) is a technique used to display 3D objects by allocating different levels of "opacity" to
different voxel values. Additional information can be shown by using color shading.
The pre-defined presets supplied with CardIQ Xpress have been optimized to show the large blood volumes and
vascular structure as distinct from the surrounding features. You can modify the settings, e.g., to accentuate
different features, then save the settings as a new custom preset.
CardIQ Volume Rendering protocols with names beginning with "Heart" automatically segment the 3D volume to
remove surrounding features (bone, lungs) in order to display only the cardiac region
Cardiac Transparency protocol allows you to display a 3D segmented view of the heart cavities and bones.
Transparency of each structure can be adjusted separately.
Batch
CardIQ Xpress is supplied with Cardiac Reformat: a Batch protocol allowing you to view, save and film batch series
of reformatted images aligned with the short and long axes of the heart.
These batch images can be used as input for the Function package.
The Cardiac Reformat protocol combines the prescription of batch series of short axis views, four-chamber long
axis views and two-chamber long axis views in the same protocol.
The Cardiac Reformat protocol replaces former short/long axis batch protocol capabilities.
Other Functions
Certain separate applications that can be used for cardiac image analysis (such as SmartScore and CardIQ
Function) can be invoked directly from the Cardiac category protocol panel.
For the use of such applications, refer to their user documentation.
If the CardEP option is also installed on the workstation, a control in the Cardiac category protocol panel allows
you to switch directly between the lists of CardIQ Xpress and CardEP protocols. You will note that some of the
protocols are common to both options.
Refer to the CardEP user documentation for information on the CardEP functions.
This indicates a potentially hazardous situation which, if not avoided, may result in minor
CAUTION
or moderate injury.
This indicates a non-hazardous situation which, if not avoided, could result in equipment
NOTICE damage, lost time, or reduced image quality.
To assure an efficient and safe use of CardIQ Xpress, it is essential to read this chapter before
attempting to use the package.
This chapter is extremely important. It contains safety information that you must thoroughly
understand before you begin to use the software.
The primary users of CardIQ Xpress software application shall be a CT, MR, nuclear medicine, or
radiology technologist, radiologist, cardiologist, or physician qualified with advanced applications
training for software competencies or other personnel that the owner feels is properly trained for
this software use (radiology assistant, physician assistant, etc...).
To avoid usability error, the user MUST have a good knowledge and understanding of both the
Advantage Workstation and primary operating function of this software application. This will be
accomplished through applications training and through the correct knowledge and application of
User Guide content. Please contact your GE representative to order and follow this mandatory
training. A qualified individual is determined by the site. The site is the owner of the program and
can be located within either hospital, clinic, or private office setting (fixed or mobile) or wherever
an AW Workstation, either a fixed or remote, is located.
Make certain that the correct version of your operator manuals are readily available at all times.
Make a point to review the procedures and safety precautions periodically.
Additional safety concerns are addressed in the Advantage Workstation Basic Display and
Volume Viewer 3 documentation.
This tool provides the physician with additional information, meant to complement
CAUTION diagnosis based on classical techniques.
Patient Confidentiality
The equipment on which the CardIQ Xpress application runs includes one or more hard disk
CAUTION drives which may hold medical data related to patients. Such equipment may in some
countries be subject to regulations concerning the processing of personal data and the free
circulation of such data.
It is strongly recommended that access to patient files be protected from all persons not in
medical attendance.
The automatic vessel tracking algorithm (vessel identification) relies on the user correctly
CAUTION marking the start and end points of the vessel branches to be tracked.
In difficult situations, such as a vessel with a complex trajectory, or vessels touching each
CAUTION other in the images, the automatic vessel tracking algorithm may not always follow the
correct trajectory.
The user should always examine the computed trajectory before moving on to the next step
in the protocol, and if necessary correct the result either by modifying the centerline trace
or by correcting the tracking points and/or adding intermediate points, then repeating the
centerline detection process.
Make sure to deposit the initial point close to the aorta center for dual branch protocols, and
CAUTION close to the ostium for single branch protrocols.
Always check the tracking result on a 3D MIP view.
Quantification Reload
Reloading a saved tracking result shall restore the tracking centerline in a similar state as
CAUTION when it was saved. The software will then compute the quantification automatically starting
from the centerline.
Due to several factors, such as variation in heart movements or the fact that some cardiac
regions may be at rest at different phase locations, this operation can result in new
misregistration artifacts in other parts of the volume.
Therefore, when using this mode, carefully study the entire volume in all rotations, before
saving, networking or filming any images created using phase registration, so as to check that
the registration has not degraded image quality.
When performing a registration (in particular, in the Around Cursor mode, or in a Vessel
CAUTION Analysis protocol), the software looks only at the misregistration in a specific region.
Due to several factors, such as variation in heart movements or the fact that some cardiac
regions may be at rest at different phase locations, this operation can result in new
misregistration artifacts in other parts of the volume.
Therefore, when using this mode, carefully study the entire volume in all rotations, before
saving, networking or filming any images created using phase registration, so as to check that
the registration has not degraded image quality.
Distance, angle and area measurements are valid only if all segments defining the
CAUTION measurement are longer than the inter-slice distance.
The geometrical accuracies of measurements performed with CardIQ Vessel Analysis, when
CAUTION related to vessel measurements, are valid only if the vessel diameter is larger than 2mm.
While working on an exam, you can hide the patient name on the views for increased
CAUTION confidentiality. If you have done so, make sure to show the patient name again on the views
BEFORE filming or saving images for diagnostic purposes.
When filming or saving images for diagnostic purposes, always make sure the patient name
is displayed on all views.
After segmentation, perform a visual check of the coronaries and manually add missing
CAUTION coronaries using Autoselect tool (Add/Remove vessels).
Segmentation [Pro]
After Left and Right Ventricle segmentation, check the accuracy of the contours of the
CAUTION segmented ventricles for ES and ED phases by looking on reformatted views.
Refine the segmentation if needed by using Autoselect tool (Add/Remove structures).
Some of these messages may be related to safety issues. For example, a message may warn that a screen or
printed image will be enlarged or reduced, and this must be taken into consideration when making a diagnosis. It
is important that users take note of and act on the information given in these messages.
The table below shows safety–related messages which may be displayed. In manuals intended for use in
countries in which the on–screen language is different from the local language, the table shows the displayed
messages and gives a translation in the local language. In manuals intended for use in countries in which the on–
screen language is available in the local language, the table is not applicable.
CardIQ Xpress comprises four main categories of protocols: Vessel Analysis, Ejection Fraction,
Volume Rendering and Batch.
3
The purpose of this chapter is to serve as an introduction to the CardIQ Xpress features, and as a
quick reference guide.
The Vessel Analysis and Ejection Fraction protocols (for both single-phase and multi-phase
datasets) consist of a number of steps. The panels associated with each step contain both the
instructions on how to perform each step and the necessary controls (buttons, menus, etc.).
Section 2 VESSEL ANALYSIS of this chapter summarizes the sequence of operations used with
CardIQ Vessel Analysis. For a full description of the Vessel Analysis procedures, refer to Chapter 5.
The associated views, controls and measurement accuracy are described in Chapter 6. The
customizing of an existing Vessel Analysis protocol is described in Chapter 7.
The Volume Rendering protocols are started from the "Cardiac" protocol panel and need little or no
further user action.
The Cardiac Reformat Batch protocol (for both single-phase and multi-phase datasets) combine
setup instructions, semi-automatic batch prescription and batch film/save controls for oblique
reformatted short and long axis batch series within the same protocol. Sections 4 VOLUME
RENDERING and 6 BATCH of this chapter summarize their use and functioning.
For a full description of these protocols, refer to Chapter 10 - Image Review.
The Left Coronary and Right Coronary protocols allow to study the coronary arteries with their sub-branches.
The Coronary protocol allows to study the coronary arteries individually.
Tree VR and Angiographic View protocols have been developed to extract and view the aorta, the coronary
vessel tree and the cardiac muscle in CT cardiac exams for both single-phase and multi-phase datasets. In brief,
the protocols extract and display the aorta, the vessel tree or the cardiac muscle by removing surrounding tissue
(bone, lungs, ...) from the 3D volume. They also provide the ability to proceed with tracking of vessels.
Because of the limitations in the available data and the different types of image processing
CAUTION
used, the Tree VR and Angiographic View images may not clearly show all features of the
3
vascular anatomy (this applies in particular to small and low-contrast features).
Tree VR and Angiographic View images should always be used together with the original
acquisition images.
The Vessel Analysis protocols function in the same way on multi-phase datasets as on single-phase datasets.
Perform the extraction on one phase and then validate the result on the other phases, paging through phases with
the vertical slider of the {review controller} or the Phase active annotation. This protocol can be used to create
movie loops (beating vessel animations).
For more details on vessel analysis, see Chapter 4 - Starting CardIQ Xpress and Loading the Exam and Chapter
5 - Vessel Analysis - Procedures for details.
Customizing Protocols
CardIQ Xpress is supplied as a set of pre-defined protocols.
As already mentioned above, you can use these protocols as they are, or use them as a starting point to configure
your own custom protocols, to account for individual differences in patient pathology.
See Chapter 8 - Vessel Analysis - Configuring Protocols.
To use the CardIQ Xpress Volume Rendering protocols for a global review of the structures in a CT cardiac exam:
• Select the exam, and if necessary the series within the exam, in the AW PatientList.
• Start CardIQ Xpress, either directly from the Patient List or from the Volume Viewer 3 "Cardiac" protocol
category.
• Select the appropriate Volume Rendering protocol.
This protocol can be one of the pre-defined protocols (Cardiac, Heart, Heart Graft or Cardiac Transparency)
supplied with the application, or a custom protocol defined by the user.
Volume Rendering protocols with names that begin with "Heart" include an automatic segmentation feature that
removes the surrounding features (bone, lungs, descending aorta) before displaying the cardiac region.
User-defined custom protocols that use the same naming convention will also include this feature.
A 3D view using the selected Volume Rendering protocol is displayed. You can now review the exam, and use
the Volume Viewer 3 VR Tools panels to modify the VR settings or select another VR preset, as required.
The VR protocols function in the same way on multi-phase datasets as on single-phase datasets. Apply the
function on one phase and then validate the result on the other phases, paging through phases with the vertical
A CT cardiac exam to be processed with CardIQ Xpress has to meet certain basic requirements.
Select the exam in the AW Patient List, then start CardIQ Xpress either directly from the Patient List or from
within Volume Viewer 3. 4
This chapter describes the image requirements and start-up procedure.
It remains the responsibility of the physician to determine whether the inter-slice distance
CAUTION of a given exam is acceptable for use with CardIQ Xpress.
Always bear in mind that, within an exam, details with dimensions in the order of or less
than the inter-slice distance cannot be identified with an acceptable degree of reliability.
- Anatomical features and pathologies in an exam to be reviewed using the Volume Rendering protocols should
NOT be located in the upper or lower end slices of the exam. The end slices are used by the software to
correctly compute the 3D images without spurious "end slice" effects, but the features in these slices are not
displayed on the 3D views.
An exam to be reviewed using these protocols should contain at least four upper and lower end slices that do
not contain any features that require review.
This requirement does not apply to exams to be analyzed using the CardIQ Vessel Analysis or Reformat
protocols.
CardIQ Xpress 5180542-100 Rev. 3 55
2 START CARDIQ XPRESS
To start using CardIQ Xpress:
• Select the exam and series to be analyzed in the AW Patient List (see the AW Basic Display user
documentation for details).
The exam should meet the image requirements listed earlier (see page 54).
You can now start CardIQ Xpress either directly from the AW PatientList or from within Volume Viewer 3. 4
When you start the CardIQ Xpress software, the Protocol Selection panel is displayed allowing you to choose the
protocol you want to use.
The same protocol is used for both single-phase and multi-phase datasets. 4
When you move the mouse cursor onto an icon, a help popup will show the function of the protocol. Click on the
icon to select and start the protocol and load the exam.
The Review Steps window displays a list of protocols allowing you to launch another protocol and to display its
associated protocol panel and layouts without having to go to the Protocol Selection panel. The protocols listed
by default in the Review Steps window are:
• Cardiac Reformat
• Ejection Fraction
• Angiographic View
• Tree VR
• Coronary Vessel Analysis
• Heart Graft
• Cardiac Transparency
Configure the list of protocols displayed and the protocol order at your convenience.
CardIQ Xpress is supplied with five pre-defined Vessel Analysis protocols: Left Coronary and Right
Coronary, for the imaging and quantitative analysis of the left and the right coronary artery, respectively,
with sub-branches; Coronary, for the imaging and quantitative analysis of single coronary arteries; Tree
VR [Pro only] and Angiographic View for the extraction of the coronary musculature from the surrounding
tissues . These protocols can be used with both single-phase and multi-phase datasets.
Each protocol contains the successive steps required to perform an analysis: vessel display adjustment,
vessel selection, vessel identification (tracking) and quantification, selection of sections of interest
(measurement points), adding quick measurements, report review, and filming or saving of the report. 5
Use these protocols as supplied, or configure them to your own particular requirements and then save them
as new custom protocols.
The current chapter describes the Vessel Analysis procedures, while the next chapter (Chapter 7 - Vessel
Analysis - Views, Controls, Measurements) describes the associated special view types and tools, and
discusses the measurements that can be performed.
To define custom vessel analysis protocols, refer to Chapter 8 - Vessel Analysis - Configuring Protocols.
The other cardiac image review protocols supplied with CardIQ Xpress are described in Chapter 10 - Image
Review.
As a first stage, the software loads the selected exam and constructs the corresponding 3D model in the
workstation memory, then performs a 3D filtering operation. This operation extracts the cardiac region by
removing extraneous tissue and enhances the cardiac vessels. If you are processing a multi-phase dataset, the
3D filtering operation is performed on all the loaded phases. 5
The result is displayed as a 3D MIP view, together with an axial and coronal view and the protocol panel. The 3D
MIP view is initially displayed with the same orientation as the axial view (inferior-to-superior) but you can rotate
it as required.
The Angiographic View protocol displays an angiographic-like 3D MIP view of the heart, showing:
• the aorta,
• coronary vessels,
• cardiac muscles.
Note : If not displayed, the aorta may be added back with a single click.
The Angiographic View Selection panel allows you to add/remove structures or vessels and to display the aorta.
Note: If a Tree VR protocol has been performed before, the (Add Vessel from Tree VR) button will allow you
to retrieve the vessels filtered during the Tree VR build.
Click (Next) to display the Identification panel.
The Tree VR protocol displays a VR view, three reformatted views and the Automatic Vessel Selection panel
that allows you to display the aorta and to grow coronary vessels.
To display the aorta on the VR view, place the cursor in the aorta on a reformatted view, and click (Display Aorta).
To grow coronary vessels on the VR view, proceed as follows:
• Using the <Shift> key on a reformatted view, place the cursor in the LMA and click (Display Vessel),
• Using the <Shift> key on a reformatted view, place the cursor in the RCA and click (Display Vessel),
Branch list
Instructions/Actions area
The Branch list is the area where you can select the vessel you want to identify.
The Instructions/Actions area displays the instructions or actions available for the selected branch.
For more information on how to identify vessels, see Chapter 6, Section 1.
5
While the message is displayed, you will have to check whether the software has correctly identified all the vessel
branches, using the method described in the paragraphs hereafter (see Verify Vessel Identification on page 73
and Verify Centerlines and Cross Sections on page 75).
Once you have checked the tracking, click (Reject) if you are not satisfied with the result. You will then go back
to Step 1 and be able to create new points. If you click (Accept), the Edition/Tools panel is displayed allowing
you to Edit, Register, Save images (see Edit, Register and Save on page 78), to explore and analyze the exam.
Instead, if an error message appears telling you that the tracking has failed, it means that the software was unable
to compute a tracking with the elements you gave it. In this case, you can:
• go back to step 1 to modify the position of the points in the vessel and define multiple points and bridges if
necessary to extract the desired vessel.
After the vessel identification and quantification, the centerlines of the vessel branches identified by the software
are displayed on the 3D MIP view. As noted before, the start-of-section point should be placed inside the vessel
near its origin, not in the aorta, to avoid vessel identification errors.
Note : The software will automatically identify a section extending into the aorta (i.e., beyond the start-of-
section point) and include this in the analysis, so that the transition from aorta to coronary will clearly be
shown in the images.
This extension is also shown on the 3D MIP view.
Incorrectly marking a "start of section" point inside the aorta rather than inside the coronary
ostium and/or marking an end point at a location that is not a part of the coronary vessel
structure to be analyzed may result in the software identifying a part of the cardiac vascular
structure completely different from the one intended.
It is the responsibility of the user to check, for each phase, that all vessel branches to be
analyzed have been identified correctly by the software. This verification is more reliable when
done on a MIP view.
5
In the case of multi-phase datasets, the choice of the initial phase conditions the result of the
CAUTION tracking for all the other phases.
The user should therefore very carefully choose the most favourable phase before launching
the tracking.
After confirming that all vessel branches have been identified correctly, the displayed views switch from the initial
3D and baseline views to a curved reformatted view, a "Lumen" view, and a MIP (thick slice) oblique view.
An active annotation on each of these views allows selecting which branch of the vessel being analyzed is
displayed.
- The curved reformatted view shows the entire selected branch in a single view, using the centerline as a
reference.
- In the Lumen view, the full length of the vessel section is displayed "unfolded" along the centerline, together
with a graph that can show either the section area or the mean diameter at each point on the centerline.
Go to Edit
Go to Registration
Go to previous or next step
in protocol
5
Once you have accepted the tracking, the other buttons of this panel become accessible:
- Click on the (Edit) button to modify the centerline or cross-sections of the tracked vessel.
- Click on the (Register) button to align a coronary vessel branch (in multi-phase datasets).
- Click on the (Save State) button to save the current state of the tracking.
Close panel
5
When you edit a cross section contour, the changes are applied only to the currently
NOTICE
selected branch. For a vessel with more than one branch you will have to select and edit
each branch separately, including the parts that may be common with another branch.
When you edit a centerline, changes done on parts common to several branches are
5
applied to all branches.
• Select (Undo Edit) to revert to the previous trace or contour if the result of the edit is not satisfactory.
• After editing either the centerline or the cross section contours, select (Accept) again to update the vessel
analysis computation.
• Once you are fully satisfied with the results, select (Close) to close the Edition Tool panel.
In this mode, the software looks only at the misregistration of the current vessel branch.
CAUTION
Due to several factors, such as variation in heart movements or the fact that some cardiac
regions may be at rest at different phase locations, this operation can result in new
misregistration artifacts in other parts of the volume.
Therefore, when using this mode, carefully study the entire volume to check that the automatic
registration has not degraded image quality.
Once the registration is over, you can go back to the quantification by clicking on the (Back) button.(For more
information on Registration, refer to Chapter 10 - Image Review, Section 3 PHASE REGISTRATION).
Overview
Once vessel identification and quantification (Step 2) are satisfactory, explore and analyze the exam using the
tools available in Volume Viewer 3. Multiple vessels can be analyzed.
You can reconfigure the measurements in the protocol by clicking the (Configure Protocol) button to define and
save a new custom protocol. You can also use Step 4 to add measurements that are not part of the protocol (see
page 88).
Procedure
The protocol will prompt successively for each point defined in the protocol. You are not obliged to mark all points:
if you do not mark a particular point, the corresponding measurements will not appear in the report.
Mark the points in the same manner as when placing points to define the vessel (Step 1). Mostly, you will be using
the Lumen view to mark the points, but other views can be used as required.
Move the 3D cursor as before by holding down the <Shift> key and moving the mouse on the views. To move the
plane of a view (image location) "back and forth" on baseline and oblique views, use the <left> and <right> arrow
keys on the keyboard or the active annotations.
5
• To mark each point, click with the left mouse button. Note that the point is marked at the current location
of the mouse cursor, not of the 3D cursor.
• To skip one or more points, click the current point label in the list of points.
• To make corrections, click the current point in the list to select the point and mark it again by clicking with
the left mouse button.
In the case of multi-phase protocols, each time you deposit a Reference or Measurement point an equivalent point
is automatically determined for each of the other phases. To check where the point has been placed on a given
phase, switch to this phase.
Note : When placing the points on the views, they are labeled automatically. If any of the labels overlap or hide
features on the views, click and drag on the label to move it to a different position.
• For changes to the existing points and measurements in Step 3, select (Configure Protocol).
This function allows you to configure the protocol to your requirements by adding, modifying and removing
measurement points and related measurements. The resulting protocol can then either be applied to the current
session only, or saved and re-used as a new custom protocol.
See Chapter 8 - Vessel Analysis - Configuring Protocols for full details. 5
Overview
Use Step 4 of the protocol to perform "quick" measurements that are not part of the protocol. These
measurements will be included in the report.
If you do not require any such additional measurements, skip this step (click on (Next) to go to Step 5).
Procedure
To add a quick measurement, select the type of measurement you require. You are prompted to place the
necessary point(s). If you wish you can create new reference points for the coming measurements, either just a
proximal reference point, defining a simple reference, or a proximal and a distal reference point, defining a double
reference. A default name (label) is automatically added in the list in the protocol panel and a default abbreviation
on the Lumen view.
In the case of multi-phase datasets, each time you deposit a Reference or Measurement point an equivalent point
is automatically determined for each of the other phases.To check where the point has been placed on a given
phase, switch to this phase.
CardIQ Xpress 5180542-100 Rev. 3 89
After placing the points, you are asked to validate the measurement (to include it in the report). Click on (Yes) to
validate, or click on (No) to cancel (the points are removed from the views and not included in the report).
To modify the name or the abbreviation of a quick measurement, or remove it:
• First select (Modify Previous Measurements). A list of the existing quick measurements is displayed.
Note : To define additional measurements that are to be included in a custom protocol, use (Configure
Protocol) in Step 3 or Step 4 (see Chapter 8 - Vessel Analysis - Configuring Protocols). The quick
measurements added during Step 4 are used only during the current session, and will not appear in a
custom protocol.
Report contents:
exam data and measurements
(exam data illustrated, measure-
ments on following pages)
Use Step 5 of the protocol to review the exam data and measurement information that will be included in the report.
Use the arrow buttons at either side of the current page label to move through the pages.
If during the review you notice any measurements that need to be corrected, return to Step 3 or Step 4 using the
(Back) button and make the necessary corrections (such as adding or moving a measurement point, or changing
an annotation).
If you are filming the report, you can select the film format (layout of the images on the film in columns and rows).
• Open the (Film Format) menu and select [2x2], [2x3], [2x4], [4x4] or [4x5] as required.
The software automatically composes and formats the report. The display will cycle automatically through the
successive images that will be included in the report. Once the report is composed, you can select (Hide Panels)
in the protocol panel to end the analysis, and select the next exam in the Patient List.
5
If you choose to film the report, it is sent to the same laser camera linked to your workstation that you use to film
images from Volume Viewer 3 or from other applications such as the AW Viewer. Refer to the Volume Viewer 3
and AW Basic Display user documentation for details. Filming is performed as a background task: the workstation
is available for the next exam as soon as the data have been "queued" for transmission to the laser camera.
If you choose to save the report, it is saved on the image disk as a new series, attached to the current exam. It
consists of a set of secondary captures (type SCPT) that can be reviewed using the AW Basic Display Viewer and
filmed as required at a later time.
In the case of multi-phase datasets, the Film and Save functions only create a report for the current phase. To
save another one you must change the phase and re-create the report for the new phase.
The filmed or saved report consists of:
Images
The second part of the report consists of a set of images.
The number and type of images in the report depend on the protocol, and on the number and type of
measurements in the analysis. They include curved reformatted images for each branch, branch views ("best"
plane oblique views of each branch) and oblique X-Section and L-Section images for the measurement points.
Screen Saves
During the analysis you can "queue" additional screen captures by means of the [Queue Report Image] menu
item on the on-view menus - activated by a right mouse click on the view - (see Chapter 7 - Vessel Analysis -
Views, Controls, Measurements). These will be added automatically at the end of a report, when it is saved or
filmed.
1 DYNAMIC AVA
Vessel Analysis protocols provide an improved means of identifying vascular trees. It is called Dynamic AVA and
it enables to:
- Use the bridging (previously called “Cross Occlusion”) feature as well as intermediary points in multibranches
protocols,
- Have a visual feedback of the identified vessels while you are defining them.
At this stage, Step 1 of the protocol, the Vessels to Analyze panel, is displayed together with three baseline views
(axial, sagittal, coronal).
You are now prompted by the protocol to place the points that are necessary to define the section of the vessel to
be analyzed. To move through the 3D volume, you use the same controls as with Volume Viewer 3: 3D cursor,
active annotations and keyboard arrow keys. 6
As a minimum, it is necessary to specify the Start point and one other point to move onto the next step in the
analysis.
After each point is added, you have the ability to display the centerline of the vessel section by clicking the (Show
Tracking) button (see paragraph 1.2 “Displaying Branches”).
When all centerlines are computed and displayed to your satisfaction or once you have deposited all branch
points, click (Next) to go to Step 2 of the protocol. This starts the automatic process of computing the vessel cross
section at each point along the centerline (quantification) and applies the default layout for the protocol.
Quick AVA comprises the following tools available in the Segment (or My Tools) palette:
- A one–click AVA tracking tool, which requires just a single click anywhere in the vessel under examination. The
software will automatically track the vessel in both directions proportionally to the diameter of the vessel.
- A two–click AVA tool that prompts you to deposit two points: a Start point and an End point. In between these
two points, this tool will calculate the centerline of the lesion.
The (Start New) button allows you to deposit further traces without restarting Quick AVA one-click or two-click.
The (Delete Traces) button allows you to delete tracking after a QuickAVA one-click or two-click before restarting
a new one.
4-1 Stenosis
To specify a stenosis:
1. In Step 2 of the chosen protocol, click (Stenosis).
2. Place the proximal reference point by clicking on any view.
3. Place the distal reference point by clicking on any view.
The start point, the end point and the minimum diameter of the stenosis are calculated automatically and
displayed on the 3D and lumen views. The stenosis measurements annotation is displayed on Reformatted and 6
Lumen views along with the length, area, percentage and minimum diameter of the stenosis.
You have the ability to move any point by clicking and dragging its associated line on the lumen view.
4-2 Aneurysm
To specify an aneurysm, proceed as described in paragraph 4–1 using the (Aneurysm) button. Start point, end
point and maximum diameter of the aneurysm are calculated and displayed automatically (as with the Stenosis
tool).
The aneurysm measurements annotation is displayed on Reformatted and Lumen views along with the length,
area, percentage and maximum diameter of the aneurysm.
6
To delete an aneurysm measurement, right–click on its annotation and select (Delete).
The Statistics tab displays a table containing the volumetric statistics of each range of voxels corresponding to a
color. The third column shows for each color the percentage of colorized volume inside the region of interest. If
several color structures have been deposited on the same exam, they can be compared in the same table.
The Configuration tab enables you to configure the color ramp. You can:
- Add/Remove color segments. By default, a new segment has no color.
- Change the color of a segment by clicking the color cell. A range of colors will display allowing you to select a
new color or to switch to “Black and White”.
Note: If you select “Black and White”, the voxels belonging to this segment will not be colorized but will 6
display their own gray level values. It allows you to create a gap between two color regions.
Note: These limits can also be adjusted by middle mouse clicking and dragging to left or right the red
annotations on the ramp.
- Switch the color ramp from steps to continuous mode by checking the Continuous Ramp box. In continuous
mode, the color ramp is smoothed to better detect repartition of gray values within each segment.
The CardIQ Vessel Analysis protocols (Left Coronary, Right Coronary, Coronary, Tree VR
[Pro only] and Angiographic View) use several view types that are either specific to or optimized
for vessel analysis, in addition to the standard view types available in Volume Viewer 3.
The Lumen view shows the currently selected vessel branch "straightened out". The curved view
shows the entire branch in a single view, using the centerline as a reference. For the oblique view
additional longitudinal and cross-section modes specific to vessel analysis are available.
In CardIQ Vessel Analysis reports you can include measurements computed automatically by the
software and measurements you perform manually. To correctly assess the accuracy of such
measurements, you should be familiar with the various factors that affect this accuracy.
This chapter describes the view types and associated controls used with CardIQ Vessel Analysis,
and discusses the factors that affect measurement accuracy.
7
Field of view
Rendering mode
(Rfmt or MIP)
Curve type
(section area or
Width of Lumen "stripe" mean diameter)
Lumen
Window Width/Level
Geometry
A Lumen view is constructed by transforming the three-dimensional centerline into a straight line and then
displaying for each point of the centerline the intersection with the plane perpendicular to the centerline.
Graph
The graph on the Lumen view can show either the section area or the mean diameter.
Note: The section area at a given point is the cross section area of the vessel lumen at that point, as computed
by the software and as indicated by the green outline on the cross section oblique view.
The mean diameter at a given point is defined as the diameter of a circle with the same area as the 7
section area at that point.
To display either section area or mean diameter, click right on the curve type active (red) annotation and select
the desired type in the drop-down menu. From this menu you can also rescale the curve to display a range of
values around that corresponding to the current cursor position, or reset the scale to display the full range.
Active Annotations
The active annotations of the Lumen view operate in the same way as elsewhere in Volume Viewer 3.
The use of the View Type, DFOV, W/L and Patient Name active annotations is identical.
When analyzing a vessel with branches, use the branch annotation to select which branch is displayed. This
annotation also appears on the curved and oblique views. When you select a branch on one of the views, the
other views automatically display the same branch.
Use the Angle annotation to rotate the Lumen view around the centerline of the vessel.
Use the rendering mode annotation to select either Reformat (Rfmt) or MIP as the rendering mode for the Lumen
7
view. In Reformat mode the Lumen view shows the "strip" or "ribbon" along the centerline that corresponds to the
current angle setting, in MIP mode the view shows the "tube" around the centerline.
Use the LP (linear position) annotation to move the 3D cursor along the centerline (the value shown is the 3D
distance, measured along the centerline, between the cursor line and the starting point).
On-View Menu
To use the on-view menu, click and hold right anywhere on the Lumen view (except on the red annotations or the
3D cursor mark), then move down to the required menu item.
[Save Image]: saves the full contents of the view (Lumen view, graph, annotations) as a screen save.
[Queue Report Image]: places the same information in a "queue" of screen saves, that will be added at the end
of a report, when it is saved or filmed.
[Clip to Width]: if you have changed one of the other views to a 3D view, this functions clips the 3D view to a
"tube" around the vessel centerline with the same diameter as the current width of the Lumen display (also see
section 3D View, page 136).
[Enlarge]: enlarges the view, so that it takes up the entire viewing area. The menu item changes to [Reset Size]
to return to the original size (one quarter of the viewing area).
[Reset Pointer]: returns the 3D cursor to the center of the 3D volume.
View type
Patient name
Branch
Angle of rotation
Field of view
Orientation
Window Width/Level 7
Curved View
Geometry
The curved reformatted view is generated by constructing a curved plane that intersects the vessel centerline, then
"flattening out" this plane for display on the screen.
Expressed more accurately, the curved view is constructed as the intersection of the
vessel centerline and a vector which sweeps out a curved surface that can be
transformed into a plane surface for display while maintaining the geometrical relations
in the plane. See illustration.
With CardIQ Xpress, the vector is oriented initially parallel to one of the main axes of the
RAS coordinate system. Also, rotation is constrained to the planes perpendicular to the
main axes. 7
S S S
A L A L L
A
Curved views:
Initial orientation and rotation axis determined by predominant vessel orientation (S-I, R-L or A-P)
- The predominant orientation of the vessel (or rather, of the line connecting the end points of the center line)
determines the initial orientation of the view (0° rotation) and the axis around which the view will rotate. See
figures above.
As an example, for a vessel oriented predominantly S-I, the vector that defines the curved plane in 7
combination with the centerline is oriented A-P, and the resulting view is oriented the same way as a sagittal
view, i.e., S-I and A-P. Rotation is around the Z-axis (S-I axis), i.e., the vector remains in the axial plane.
R L A P R L
Axial Sagittal Coronal
P I I
- When a curved view is rotated, the software always displays the view in such a manner, that the orientation
matches the display conventions used for the baseline views. See figures above.
As a result, when a curved view is rotated it may suddenly flip left-right or rotate 90° in order to match the
orientation of the baseline view nearest to the current angle of the display plane. Note that only the display
changes, not the axis around which the curved display is rotated.
You also have the possibility of creating a movie loop around a Curved view (refer to Chapter 10 “Movie Creation”,
Section 1 “Batch Loop”). In this case the current aspect at the time the movie is started is kept and therefore flip
left-right or rotate 90° are not possible.
View type
Patient
Branch
Linear position of cursor name
from start of centerline
Field of view
Orientation
Section type
Rendering mode
Slice thickness
7
Window Width/Level
Oblique View
The oblique reformatted views in CardIQ Xpress are the same as in Volume Viewer 3, with the addition of a
number of oblique modes specific to CardIQ Vessel Analysis. An X-Section view shows the cross section at the
3D cursor, an L-Section view shows a plane tangent to the vessel, and a Best L-Section view is oriented so as to
show as much of the vessel as possible.
The vessel cross section contour is shown in green on the views.
Otherwise, the views are the same as in Volume Viewer 3, i.e. they are plane reformatted slices. By default a
"thick" slice in MIP rendering mode is displayed (using MPVR, see Volume Viewer 3 user documentation). You
can modify the slice thickness, or display a "thin" (one voxel thick) slice.
Measurements
All measurements tools available in Volume Viewer 3 can be used on an oblique view. Refer to the Volume Viewer
3 user documentation.
Active Annotations 7
The active annotations on the oblique view operate in the same manner as elsewhere in Volume Viewer 3 (see
the Volume Viewer 3 user documentation).
The use of the View Type, DFOV, slice thickness, thick-slice rendering mode (Average, MIP, MinIP or VR), W/
L and Patient Name active annotations is identical.
Use the [Create Trace], [Clear Last Point] and [Clear Trace] menu items to create 3D traces on the view if
required. They do not affect the centerline computed by Vessel Analysis.
Use the [Center on FOV], [Center on Object] and [Center on Cursor] menu items to center the oblique view on
the current field of view, the current volume of interest or the current 3D cursor position.
These menu items are the same as those of the standard oblique view. See the Volume Viewer 3 user
documentation.
The specific features of the 3D views are described below. For the other Volume Viewer 3 view types, refer to the
Volume Viewer 3 user documentation.
To display the volume around the centerline corresponding to the width of the Lumen view:
• Display a 3D "MIP" or "CVOI" view, then select [Clip to Width] in the Lumen on-view menu.
To display a curved VOI (Volume Of Interest) i.e., a “curved slice” that uses the centerline as a reference and that
is displayed in 3D:
• Display a 3D "MIP" or "VOI" view, then select [Curved VOI] in the drop-down menu of the shutter mode active
annotation.
Adjust the thickness of the 3D “slice” by means of the VOI slice thickness active annotation that appears next
to the shutter mode active annotation when a curved VOI is displayed.
To display the 3D view with a spherical "shutter" centered on the 3D cursor (only the volume inside the sphere is
displayed):
• Display a 3D "MIP" or "VOI" view, then select [Shutter on Cursor] in the drop-down menu of the shutter mode
active annotation.
Adjust the diameter of the sphere by means of the shutter size active annotation that appears next to the
shutter mode active annotation when a shutter is used.
When you move the 3D cursor, the shutter moves with it.
7
Summary
A CT exam (data set) consists of voxels (volume elements). The dimensions of a single voxel determine the lower
bound of the measurement accuracy (geometrical accuracy).
7
The final accuracy is further limited by a number of factors.
Automatic measurements computed by the software (vessel quantification) are affected by the limitations in the
available data. Noise, patient motion, acquisition and reconstruction imperfections, partial volume effects, the
small size of some features, etc., all tend to reduce the final accuracy that can be obtained.
Voxel Dimensions
The image set resolution, i.e., the dimensions of the voxels (volume elements) that constitute the image set, is
determined by the size of the field-of-view, the matrix size and the inter-slice distance.
In a typical CT image set to be used for vessel analysis, the voxel cross section in the acquisition plane will be in
the order of 0.3x0.3 to 0.5x0.5mm for a 512x512 acquisition matrix and a field of view in the order of 15 to 25cm.
Ideally, voxels should be isotropic (with the same dimensions along all three axes), i.e., the inter-slice distance 7
should be the same as the voxel dimension in the acquisition plane. In practice, however, considerations such as
patient irradiation dose levels will usually lead to the choice of a larger inter-slice distance.
To reliably identify and measure the small-diameter vessels that are significant in cardiac analysis, inter-slice
distances in the order of 1 to 2mm, and less if possible, should be used. An upper limit of 2.5mm may be
acceptable for some cases.
Geometrical Accuracy
For CT image sets, the largest dimension of a voxel (normally the inter-slice distance) determines the geometrical
accuracy:
- For a distance measurement, the geometrical accuracy of the displayed length is equal to +/- largest voxel
dimension,
- For an angle measurement, the geometrical accuracy depends on the length of the segments, and
improves as the length of the segments increases. As an example, for an angle measured between
segments which are five times larger than the largest voxel dimension, the geometrical accuracy of the
displayed angle value is equal to +/- 10 degrees.
- For an area measurement, the geometrical accuracy of the displayed area value is equal to +/- the
circumference of the region of interest multiplied by (largest voxel dimension)2 / 2.
The geometrical accuracy defines a lower bound on the overall accuracy that can be obtained. Further limiting
factors are the acquisition accuracy, vessel analysis quantification algorithm, partial volume effects, display
settings and display resolution.
Note: The accuracy (+/-) values shown in the Vessel Analysis reports corresponds to the geometrical accuracy
as defined above. 7
Distance, angle and area measurements are valid only if all segments defining the
CAUTION
measurement are longer than the inter-slice distance.
Acquisition Accuracy
The quality of the vessel analysis, quantification and measurement results is critically dependent on the quality of
the original acquisition.
Cardiac acquisitions can contain heart beat motion and breathing motion artifacts that will degrade the vessel
analysis results. These can be caused by inadequate synchronization with the heart beat, or insufficient temporal
resolution.
Because of the small size of the coronary vessels, the acquisition parameters (image resolution, inter-slice
distance) should be chosen carefully with respect to the dimensions features to be examined. Insufficient
acquisition resolution may result in degraded measurement results and the appearance of artifacts such as false
stenosis. Insufficient contrast may have the same consequences, and may also result in vessel identification
errors.
Any errors in the acquisition and reconstruction process such as calibration and slice interpolation errors will be
added to the same extent to the measurement error.
Before using an image set for vessel analysis, the user should check for the presence of heart
CAUTION beat motion and other artifacts on axial and coronal images. 7
It is the user's responsibility to insure that sufficiently accurate acquisition parameters are
used with respect to the dimensions of the features to be analyzed.
Insufficient acquisition resolution (temporal, dimensional and contrast) may result in
pathologies or other anatomical features not being visible on the images. It may also result
in degraded measurement results and the appearance of artifacts.
Quantification Algorithm
The vessel quantification algorithm computes the vessel cross-section contour at each point along the centerline.
These contours are displayed on the oblique X-section and L-section views. The corresponding computed
measurements (cross-section area and mean diameter) are shown by the curve on the Lumen view, and can be
included in the report.
The algorithm provides a best fit to the data available in the exam. However, the user should be aware that the
limited spatial and density resolution of the clinical images processed with CardIQ Xpress also imposes limitations
on the attainable measurement accuracy.
Correct vessel quantification is critically dependent on such factors as acquisition image quality and voxel size
(image resolution and inter-slice distance), and anomalies may occur because of the limitations in the available
data. It is the responsibility of the user to verify the result of the vessel identification and quantification process 7
before using the data for analysis.
Several factors may combine to degrade the accuracy of the quantification:
- The small size of the cardiac vessels (the vessel cross section is defined by only a limited number of voxels),
- Low contrast between the vessel and the surrounding tissue,
CardIQ Xpress is supplied with five pre-defined Vessel Analysis protocols: Left Coronary and Right
Coronary for the imaging and quantitative analysis of the left and the right coronary artery,
respectively, with sub-branches; Coronary for the imaging and quantitative analysis of individual
coronary arteries; Tree VR [Pro only] and Angiographic View for the extraction of the coronary
vessel tree structure and aorta (and myocardium for Angiographic View) from the surrounding
tissues. Use these protocols as they are, or use them as a starting point to configure your own custom
protocols, to account for individual differences in patient pathology.
This chapter describes how to create custom Vessel Analysis protocols as required, by configuring
the pre-defined protocols through adding, modifying or removing points.
- Root: this is the start of the section to be analyzed. This point cannot be
Interme-
modified or removed.
diate - Intermediate: use this type to better define the vessel, and in particular to
remove ambiguities where the vessel identification algorithm might not identify
the correct volume of interest.
Branch
- Branch: use this type to define branches. The vessel identification algorithm
Branch will track the vessel from the start ("root") point up to each branch point
separately.
Note: When adding or modifying points, "Intermediate" and "Branch" are the only options available.
Note: Occasionally, in complex situations, it may occur that the vessel tracking algorithm does not succeed in
identifying the volume of interest correctly (this may be indicated by an error message, or it may be
obvious from the display).
This can be resolved by adding one or more intermediate tracking points. These will be used by the
vessel tracking algorithm as additional information while determining the volume of interest. They are
not used by the subsequent vessel identification process, so that the computed vessel centerline may
not pass exactly through such intermediate points.
To remove a point:
• Select the point in the list by clicking on its label.
• Select (Remove).
The point is deleted from the list without requiring user confirmation.
Notes: Take care when removing points. Once deleted they cannot be restored.
The starting point (type "Root") cannot be removed.
At this stage you can save the protocol (see page 166) or return to the panel for Step 1 "Define Section to Analyze"
by clicking on the (Back) button.
The reference points are located on the centerline of the vessel and associated with measurements such as
diameters and cross section area at that point.
The measurements refer to measurements between points, such as angles, or the length or volume of a section
between two points. If the points do not already exist in the protocol you must add them before you can add the
related measurement.
You add, remove or modify reference points and measurements separately (see page 156 and page 161,
respectively).
Close panel
Save protocol
- Manual Diameter: only a manually defined diameter (distance) measurement will be associated with the
point. To perform such a measurement during analysis, move the 3D cursor to the appropriate cross
section, then place two points on the oblique X-section view. You may want to include these instructions
in the "prompt" text (see below).
An example would be the presence of a thrombus or calcification, where an automatic measurement will
show the diameter of the lumen, and the user may want to add a measurement of the actual vessel
diameter.
• Select the Diameter Type: [No Diameter], [Auto Diameter] or [Manual Diameter].
• Enter the necessary information in the three text fields. Click inside each field to select it, then enter the text
from the keyboard. For corrections, move the text cursor with the left and right arrow keys or by clicking with
the mouse. You can insert characters from the keyboard, or delete the character before the text cursor with
the <BackSpace> or <Del> key.
Point name: enter the full descriptive name of the point. Try to avoid names longer than the width of the text 8
entry field (40 characters max.).
To remove a point:
• Select the point in the list by clicking on its label.
• Select (Remove).
The point is deleted from the list without requiring user confirmation.
Note: Take care when removing points. Once deleted they cannot be restored.
At this stage you can configure the related measurements (see page 161), save the protocol (see page 166) or
return to the panel for Step 3 "Select Section of Interest" by clicking the (Close) button.
List of measurements
Measurement type
Click on label to select a measurement
(to add a measurement under the selected one,
or to modify or remove a measurement)
Select (Add), (Modify) or (Remove)
The list of existing measurements is displayed. There are three types of measurements:
- Length: distance measured along the vessel centerline between the two points.
- Volume: volume of the section of the vessel between the two points.
- Angle: angle between a straight line connecting the two points and the vertical (RAS coordinate system).
Enter abbreviation
Enter name for measurement
• Enter the necessary information in the two text fields. Click inside each field to select it, then enter the text
from the keyboard. For corrections, move the text cursor with the left and right arrow keys or by clicking with
the mouse. You can insert characters from the keyboard, or delete the character before the text cursor with
the <BackSpace> or <Del> key.
Measurement name: enter a descriptive name for the measurement. Try to avoid names longer than the
width of the text entry field (40 characters max.). 8
• In the side-by-side lists, select (highlight) the start point in the From Point list, and the end point in the To Point
list. If necessary use the up/down buttons under each list to scroll through the list.
You can only set up measurements between existing points. To set up measurements between points not yet
in the list, first return to the Protocol Configuration panel and create the new points as described earlier
(page 156).
• Select (Accept) to validate the new measurement and return to the Protocol Configuration panel, or
(Cancel) to annul the operation.
If you want to save the modified protocol for future use, you can do this at any stage before you actually close the
protocol. To do so:
• Select (Save Protocol) in the Configure Tracking Points or Configure Protocol panel.
If necessary, first move to either Step 2 or Step 4 and select (Configure Protocol).
• In the Save Configuration as New Protocol panel that is displayed, click inside the Name: text entry field,
and enter the new name from the keyboard.
• Select (Save) to save the protocol, or (Cancel) to annul the operation.
If the name already exists, a message will alert you to this. In the message window, select (Cancel) to repeat
the operation with a different name, or (Overwrite) to replace the existing protocol with the modified one.
The protocol will be saved in the same Volume Viewer 3 protocol category as the original protocol.
If the original protocol is a multi-phase protocol, the saved protocol will also be multi-phase. The chosen name of
the new protocol will automatically be followed by “MP”.
After saving the protocol, return to the Step 2 or Step 4 panel using the (Back) buttons. 8
CardIQ Xpress Pro is supplied with the Ejection Fraction protocol, for the imaging and quick computation
of the left ventricle ejection fraction parameters.
This protocol contains the successive steps required to perform left ventricle segmentation: cardiac
reformat, (ES) and (ED) phase selection, cut plane selection, edition of the segmented volume, display of
the heart functional parameters.
The Ejection Fraction protocol steps include the Cardiac Reformat protocol (as a first step) to the
computation of the left ventricle ejection fraction.
The Ejection Fraction protocol uses several view types: Short Axis, Long Axis, Vertical Long Axis that come
in addition to the standard view types available in Volume Viewer 3.
This chapter describes the view types and associated controls used with the Ejection Fraction protocol.
All standard and optional tools, view types, etc. that are part of the Volume Viewer 3 application are also
fully available at all times. Refer to the Volume Viewer 3 user documentation for full information on those
functions.
For more information about the Cardiac Reformat step, refer to Section 2 of Chapter 9, Image Review.
• Click the arrow buttons on the panel to display the different phases on all views,
Note: To display the different phases, you can also right-click the phase annotation or press and hold <ALT>
while hitting <Page Up> or <Page Down> .
Note: By default, the first phase to select is the End Systole phase.
• Once you have selected the End Systole phase, click (Store Phase) to validate. The panel switches
automatically to End Diastole selection mode allowing you to select the End Diastole phase,
• Select the End Diastole phase and click (Store Phase) to validate,
• Click (Next): the Prepare Segmentation panel is displayed,
Note: Results are displayed on both the Ejection Fraction results panel and the VR view.
The primary CardIQ Xpress tools for the review and analysis of CT cardiac exams are the Vessel Analysis
protocols described in the previous chapters.
Additionally, CardIQ Xpress is supplied with:
- An Ejection Fraction protocol [Pro only] to calculate the ejection fraction from the left ventricle volume at
end systole and end diastole (see Chapter 8 - Ejection Fraction protocol),
- Volume Rendering protocols customized for cardiac image review,
- A Batch protocol to view, save and film batch series of reformatted images aligned with the short and long
axes of the heart.
- A Phase Registration protocol (for multi-phase datasets) to align a ventricle or a coronary vessel.
This chapter describes the use of the Volume Rendering, Batch and Phase Registration functions.
All standard and optional tools, view types, etc. that are part of the Volume Viewer 3 application are also
fully available at all times. Refer to the Volume Viewer 3 user documentation for full information on those
functions.
CardIQ Xpress is supplied with a set of Volume Rendering (VR) protocols (Cardiac, Heart, Heart Graft and
Cardiac Transparency) optimized for cardiac imaging.
VR "Heart" protocols (where the name of the protocol begins with "Heart") first automatically segment the exam
to extract the cardiac region, then display it using VR presets optimized for cardiac imaging. The other VR
protocols in CardIQ Xpress use volume rendering to display the entire exam, without segmentation.
Use these protocols to obtain a global view of the cardiac region, to examine the overall spatial relations and those
parts of the vasculature located on the outside of the region. You will mostly use the protocols as a starting point,
then adjust the settings to optimize the display.
To examine the vessels separately in more detail, use the Vessel Analysis protocols.
See Chapter 5, Chapter 7 and Chapter 8.
This section describes the protocols and provides a summary of the principles of Volume Rendering and its
controls, with particular reference to its use for cardiac imaging. For a full description of volume rendering, consult
the Volume Viewer 3 user documentation.
"Heart" Protocols
The CardIQ Volume Rendering protocols with names that begin with "Heart" include an automatic segmentation
feature.
They automatically segment the exam to extract the cardiac region by removing surrounding structures such as
the sternum, ribs, spine and lungs, and unconnected blood vessels such as the descending aorta, from the 3D
volume. The remaining cardiac region is then displayed using volume rendering.
The volume rendering settings are determined by the VR preset included in the protocol. You can select other VR
presets, or use the Volume Viewer 3 VR Tools to modify the settings.
When used with a multi-phase dataset, the Heart protocols perform the extraction of the cardiac region for all the
phases. They can be used to generate a cine loop (movie) of a beating heart. For more information, refer to
Chapter 10 “Movie Creation”.
Note: To include the automatic segmentation feature in a custom protocol created by modifying an existing VR
protocol, save the protocol under a new name that also begins with "Heart".
Volume Rendering
In brief, volume rendering is used to display 3D objects by allocating different levels of "opacity" to different voxel
values. Additional information can be shown by using color shading, i.e., displaying different voxel value ranges
in the image in different colors.
The use of volume rendering takes into account that tissue density is not uniform and that the distinction between
two features of different density is determined by a range of voxel values rather than by a single fixed value.
An example is the display of contrast-enhanced vessels with typical voxel values in a range of 200 to 450 HU (but
some as low as 100 HU) embedded in soft tissue with typical voxel values in a range of -100 to +100 HU.
Presets
The settings of the VR presets in the CardIQ Volume Rendering protocols are primarily aimed at displaying
contrast-enhanced blood within the exam, i.e., the arterial vasculature and the large volumes such as atriums,
ventricles and aorta. You can adjust the settings in these presets to optimize the display.
While you can use these presets as they are, their primary purpose is to act as a starting point: after applying a
preset, adjust the settings to optimize the display of the anatomical features and/or pathologies being examined.
The settings you will be using may vary from exam to exam, depending both on the characteristics and quality of
the acquisition data and on the particular features and pathologies in the exam.
When you change any of the control settings the display is updated each time, allowing you to rapidly determine
the best settings for the features you are currently examining.
You can save the settings that best match your particular requirements as new custom protocols.
The VR presets supplied with CardIQ Xpress use color shading for added contrast between anatomical features
(e.g., to accentuate calcifications).
Select the curve type with the buttons below the Opacity control bar, then move the two diamond-shaped sliders
to set the control points for the selected curve type, i.e., the voxel values of the endpoints of the curve.
- The (upramp) is the most commonly used curve type. It is used in the CardIQ VR presets.
- The (show range) curve type can be used to "hollow out" the vessels and blood volumes. Select a voxel
range corresponding to the outer limits of the vessels and blood volumes only, then apply a cut plane (see
page 189) and rotate the 3D volume as required. This can allow you to examine some interior features.
Cut planes: you can apply a front cut or back cut plane to the 3D view.
- A front cut will remove all features in front of a plane perpendicular to the line-of-sight passing through the 3D
cursor. Such a cut plane, together with appropriate rotation of the 3D volume and suitable VR settings, can
for instance be used to view a 3D cross section of a region of interest.
- To select a cut plane, use the drop-down menu of the cut plane active annotation ("No cut" by default).
Cut planes are a display feature only, they do not change the 3D volume.
Note: In VR "Heart" protocols (where the name of the protocol begins with "Heart"), the automatic
segmentation removes external features such as sternum and ribs.
- If for any reason you use a VR protocol without automatic segmentation, the sternum and ribs tend to obstruct
the display of features on anterior views. If you cannot bring a feature of interest into view by simply rotating
the 3D volume, placing a front cut plane just behind the sternum on an anterior view will remove the sternum
and most of the ribs without affecting the display of the cardiac region.
3D shutter: you can apply a 3D "shutter", i.e., a spherical cut plane centered on the 3D cursor, to the 3D view.
- Only the part of the exam located inside the sphere is displayed.
- To apply a 3D shutter, select [Shutter on Cursor] in the drop-down menu of the shutter mode active
annotation ("No VOI" by default). Use the shutter size active annotation (which appears when the shutter is
present) to adjust the diameter of the sphere.
The 3D shutter is a display feature only, it does not change the 3D volume.
CardIQ Xpress 5180542-100 Rev. 3 189
10
2 CARDIAC REFORMAT BATCH PROTOCOL
Launching the Cardiac Reformat protocol automatically displays oblique views of the heart oriented along Short
Axis, Long Axis and Vertical Long Axis:
• Sagittal (S),
• Long Axis (LA),
• Vertical Long Axis (VLA),
• Short Axis (SA).
Batch lines
Batch center.
Batch rotation points (red dots) Click and drag to move batch
Click and drag to rotate batch
The Short Axis protocol uses the following default batch setup:
- Parallel oblique batch of 25 views with 4.0mm spacing,
- Field of view 20.0cm,
- The views are 4.0mm thick slices (MPVR), using Average rendering mode,
- Output mode is defaulted to Save.
• To save the batch images as a new series on the workstation hard disk, select (Save).
Note: The default output mode for the protocol is Save.
To film the batch images, select (Modify) and change the mode to [Film] in the Output pull-out menu.
To both film and save the batch at the same time, set the mode to [Film/Save].
Select (Accept) to close the panel. The legend of the button in the Batch Film panel will reflect the new
setting.
Batch center.
Click and drag to move batch
Batch center.
Click and drag to move batch
Batch lines
• Select the reference phase using the Phase active annotation at the top of the views to page through all the
loaded phases.
• Use the oblique tool (yellow lines on the top right view) or the cursor to position the oblique view so as to be
able to properly view the artifacts to be corrected. (For more information on how to position the oblique view,
refer to Volume Viewer 3 User Guide, GE document ref. 5169457-100, Chapter 8 “Reformatting”, Section 2
“Oblique Reformatting”).
• Select (Next).
The green lines displayed on the views represent groups of slices. The percentage displayed on the right of the
lines correspond to the phase associated with the group located beneath the line. Each group is composed of
slices which were reconstructed during the same heart cycle and at the same cardiac phase. Therefore
misregistration artifacts appear only between groups of slices rather than within a group. To start with, all groups
of slices belong to the same phase. If you want a better vision of the views, you can hide them by deselecting the
(Identify Slices) button.
• Select the registration mode, (Between Lines) or (Around Cursor), depending on wether you want to use
the red lines or the cursor to define the section to be registered.
- The (Reg) annotation next to the name of the current phase shows that at least one slice of the volume has
been registered.
- Reg. Ph: 70% on the left of the view: original phase of a registered slice (on the Axial view only).
Cardiac Annotation
Some specific annotations are displayed on the left-hand side of axial images. These annotations are linked to
each view and change when you page through the views.
- Average heart rate
- BPM: cardiac rythm (in beats per minute)
- SSEG (Snapshot Segment), SSB (Snapshot Burst), SEGM (non gated reconstruction) : used cardiac
reconstruction algorithms
- 330 ms: temporal resolution.
Filter Action
Card 1 Replaces the first slice of each band with an interpolated slice
Card 2 Replaces the last slice of each band with an interpolated slice
Card 3 Replaces both the first and last slices of each band with an interpolated slice
When a cardiac filter is active, all views showing the filtered volume have the string “(Card 1)” (resp. 2 or 3)
appended to the phase annotation.
Note: The current filter remains active when switching to another protocol.
Note: [Pro only] If a cardiac filter is applied, statistics for Color Identification will not be available. You must
remove the cardiac filter in order to display statistics to ensure accuracy.
Note: Cardiac filters can not be used in conjunction with phase registration.
Color Ramp
Once a color plaque or color ROI is deposited, it is possible to see volumetric statistics and to adjust the color ramp
displayed on the left of the viewport.
Click the color ramp: the Color Map Table panel containing three tabs is displayed.
The Statistics tab displays a table containing the volumetric statistics of each range of voxels corresponding to a
color. The third column shows for each color the percentage of colorized volume inside the region of interest. If
several color structures have been deposited on the same exam, they can be compared in the same table.
The Configuration tab enables you to configure the color ramp. You can:
• Add/Remove color segments. By default, a new segment has no color.
• Change the color of a segment by clicking the color cell. A range of colors will display allowing you to select a
new color or to switch to “Black and White”.
In CardIQ Xpress, all the Volume Viewer 3 filming tools are available. However, the software offers specific 11
additional features.
With multi-phase datasets, the user will be able to create movies of a beating heart with the Movie function.
For more information regarding the Movie function, refer to section Movie of the Volume Viewer 3 User
Guide, GE Ref. 5169457-100.
The Batch Loop function offers the possibility of creating a batch film focused on a specific vessel branch
(see section below).
All the animations can be saved in the Patient List or exported.
The regular AW Basic Display and Volume Viewer 3 tools are available within CardIQ Xpress to
save and film images.
The CardIQ Vessel Analysis protocols automatically generate a report that can be filmed and
saved as required. To fill in a Report with any CardIQ Xpress Pro protocol, refer to Section 2 in
this chapter.
12
You should take due care that saved or filmed images always include the necessary annotations.
• To save individual images, use either the <S> key on the keyboard or the [Save Image] menu item in the on-
view menus. 12
• To assemble a set of images that can be saved and filmed as required, use the Filmer.
• To save and/or film a batch of regularly spaced oblique images, or 3D images rotated in steps, use the Volume
Viewer 3 Batch Film function.
This Batch Film function is also included in the Cardiac Reformat protocol to save and/or film batch series of
short and long axis views. See Chapter 10 - Image Review.
Reformatted views (2D oblique and baseline views) are saved either in Rfmt or SSave format. Select the desired
format using (Filming Tools) > [Film/Save Options] in the control panel.
Pre-Exam Data
Click the Pre-Exam tab in the Report panel and fill in the following areas:
• Family and Patient history,
• Exam procedure,
• Patient follow up,
• Patient form.
Post-Exam data
Click the Conclusion tab in the Report panel to display Post-Exam data:
• General images (images sent to the report when no findings have been created),
• Conclusion selector,
• Conclusion.
12
The conclusion selector allows you to select how the conclusion will appear in the Conclusion area. To customize
the report conclusion, click the (Report) button in the main panel, click (Configure) and follow the panel
instructions.
When using the Rfmt format, system information (patient name, location, etc.) is saved together with the image
and recovered by other viewing applications as required. Only user annotations (text, graphics) become part of
the image. 12
When using the SSave format, the saved images are of type SCPT (secondary captures). On such images all
annotations become part of the saved image and cannot be modified by another viewing application at a later
stage.
Using this format, all annotations (such as system annotations, text annotations, etc.) that are displayed on the
screen will also appear on the filmed or saved images. In the vessel analysis reports, extra annotations that
identify the images are also added automatically by the software.
If the annotations on the screen have been turned off (see the Volume Viewer 3 user documentation) they will not
be present on the filmed or saved images either.
Although images without annotation may be suitable for teaching purposes, diagnosis
CAUTION should not be performed with such images.
When filming or saving images for diagnostic purposes, always make sure the patient name
CAUTION is displayed on all views.
12
Layout
12
Loading a Save State will display the same layout as the one displayed when the Save State was performed.
Segmentations
The Save State allows you to save the following segmentations if previously computed:
• Tree VR
• Angiographic View
• Heart
• Heart Graft
Recalling them (when Save State is loaded) will not take additional computation time.
To obtain satisfactory identification (tracking) of the coronary vessels, you need to mark the points at the
right location in the vessels.
This appendix illustrates some examples of suitable points for the left and right coronary arteries in a typical
exam.
These images are not intended as anatomical references but only as examples of how to
NOTICE place the points on the images. A1
A1
A1
A1
A1
A1
A1
A1
A1
A1
A1
3D Model - The representation of the 3D (three-dimensional) image data in the workstation computer memory.
3D models can be saved, archived and networked.
Active Annotation - A system annotation on a view that can be modified by the user to control certain viewing
parameters (e.g., window width and level), either by adjusting a numerical value, or by selecting an item from a
drop-down menu. Active annotations are displayed in red.
Algorithm - A step-by-step process used to solve a problem. In the CardIQ Vessel Analysis protocols, this refers
in particular to the process used to identify (track) and quantify the vessel section to be analyzed.
Annotation - Generally, workstation-supplied text which accompanies an image when it is displayed on-screen, G
describing when and how that image was acquired, with what parameters. Also, text and measurement
information added on a view by the user.
Artefact - Feature in an image resulting either from the initial data acquisition or subsequent computer processing
that does not correspond to a real feature in the original anatomical structure. Also see Partial Volume Effect.
Baseline view - A basic axial, coronal or sagittal view, aligned parallel to the main axes of the RAS coordinate
system.
Browser - The panel used in the AW 3.1 Basic Display application to select available images for display and
manipulation. Referred to as the Patient List in AW 4.0 or later.