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EXPERIMENTAL
2.1. INTRODUCTION
This chapter deals with the study of thermodynamics, compressibility and transport
properties of homologous low molar mass compounds which are constituents of proteins, i.e.
Glycine, Alanine, Valine, Leucine and L-Histidine which is a semi essential amino acid having
and fructose. The various experimental techniques, employed in the present investigation along
The experimental procedures for the measurement of density are done by using a
single capillary pycnometer, viscosity by using Ubbelohde type suspended level viscometer,
operating at 2 MHz. (Model M-84, Mittal Enterprises, India). Also, the precautions to be
followed with handling of the experimental setup are discussed. The standardization of the above
instruments has been done by evaluating the thermodynamic parameters such as partial molal
volume V0, partial molal compressibility K 0, and viscosity B-Coefficient of all the amino
acids, and monosaccharides are reported in this thesis in aqueous solution from experimentally
measured physical parameters density , ultrasonic speed u , and viscosity are compared with
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2.2. MATERIALS
The chemicals used in the present investigation along with their abbreviated names,
chemical formula, chemical structure, purity and their sources are listed in Table 2.1
Table 2.1. Chemicals Used for the Study with Abbreviated Names, Chemical Formula,
Ala
H O Sisco Research Lab. Pvt.
NH 2 C C OH Ltd., Mumbai
DL-Alanine C3H7NO2 99%
CH3
H O
Val NH2 C C OH
DL-Valine 99% Aldrich, U.S.A
C5H11NO2 CH
H3C CH3
H O
H O
NH 2 C C OH
L- Histidine His 99% Loba Chemie Pvt. Ltd.,
CH2
C6H9N3O2 Mumbai
N
NH
50
D- Fructose Fru 99.9% Merck Pvt. Ltd., Mumbai
C6H12O6
d-xylose, and d-fructose used in the study have been dried over P 2O5 in a desiccator for 72 hrs.
The solutions have been prepared by mass and have been stored in special airtight
bottles to minimize absorption of atmospheric moisture and carbon dioxide. Double distilled
deionised water with a conductivity of 1.510-4 -1m-1 has been used to prepare aqueous
monosaccharide solutions. The mass measurements have been made using a high precision AND
2.3.1. Precautions
To prevent the formation of air bubbles, all solutions have been preheated to 5 C.
above the measuring temperature before taking reading (Ali et al., 2006).
51
The densities of the solutions have been measured using a single stem pycnometer
(pyrex glass) of bulb capacity of 1310-3 dm3 having a graduated stem with 510-8 m3 division.
The capillary has a uniform bore and could be closed by a well-fitted glass cap as shown in
Figure 2.1.
recorded at each mark on the pycnometer as a function of temperature in order to determine the
total volume of pycnometer as well as volume between the two successive divisions of the
graduated stem. From the known weight of water and density of water at different temperatures,
the exact volume of the pycnometer at different marks on the stem of the pycnometer has been
calculated.
The calibrated empty pycnometer has been dried initially and then weighed. The
sample solution has been transferred into it with the help of jet. Necessary care has been taken to
avoid the formation of air bubble in the sample. The excess solution sticking to the capillary has
been removed using the strips of Whatman filter paper. The weight of pycnometer with the
sample solution has been measured again. The pycnometer with the sample solution has been
52
kept in a temperature controlled water bath (Euro Therm, supplied by Mittal Enterprises, India)
at the desired temperature until no further change in the level of the solution in the capillary has
been observed. This level has been noted and used in the calculation of densities as below:
The exact volume V of pycnometer for the particular mark on the stem is the ratio of
( W2 - W1 )
the exact weight (W2 W1) and density of water r0 at the desired temperature, i.e. V =
r0
(2.1).
From the above equation, volume of the pycnometer for different marks on the stem
of the pycnometer can be calculated. The values of volume at each mark of the stem of
pycnometer as a function of temperature are plotted to calculate the density of the solution at a
given temperature. The reproducibility in the density measurements has been within
0.1 kg m-3.
2.4.1.3. Precautions
i) The pycnometer is a highly delicate glassware that should be handled gently and
carefully.
53
ii) Direct handling of pycnometer with bare hand is prohibited. Tissue paper should
be used to avoid the sticking of dust particles which would contribute to its
weight later.
iii) Entrapment of air bubbles must be avoided carefully while filling the sample in
the pycnometer.
iv) Excess liquid sticking to the walls of capillary should be removed using fine strips
v) The pycnometer containing the test solution should be kept in thermostatic water
2.4.2.1. Theory
Longitudinal waves with frequencies above 20 KHz. are termed as ultrasonic waves.
The propagation of an ultrasonic wave in liquids and liquid mixtures has been carried out by
different methods (Mikhylov, 1949, Kudryavtsev, 1952, and Parthasarthy, 1935). An ultrasonic
interferometer is a simple and direct device to determine the ultrasonic speed (u) in solutions
with high degree of accuracy (Figure 2.2). The ultrasonic interferometer consists of a
piezoelectric crystal slab (like quartz) with parallel faces developing charges of opposite polarity
on their faces when it is strained. Such a crystal slab exhibits electrostriction when placed in a
54
The ultrasonic interferometer set up has basically a wheatstones network. Two arms
of the network are the load resistance of two identical pentode oscillators and the plate
resistances of the pentodes forming the other two arms. The oscillators have been stabilized
between the junction of the load resistance and the load frequency choke. This acts as the
detector. The output of one of the oscillators is fed to 2 MHz. quartz crystal mounted to a cell.
The cell can be filled up with any desired sample in which the velocity of sound is to be
determined. A reflector can be moved up or down using a screw head. The metal reflector can be
kept as close to the crystal transducer as possible. A finite current may be allowed to pass
through the microammeter. This is done by adjusting the adjust and gain knobs. When the
reflector is moved, it can go to such a height and a standing wave pattern can be formed between
the transducer crystal and the reflector. At this moment, the vibrating crystal will draw energy
and thus load the oscillator to which it is connected. The loading causes a greater imbalance in
the bridge leading to a decrease of current through the microammeter. The meter, thus, gives a
minimum reading. As the reflector is moved further, the standing wave pattern could not be
formed and the meter needle goes back to its original position. The distance d, moved by the
reflector to register the two consecutive minimum readings in the microammeter, will correspond
to ( l / 2 ) of the ultrasonic wave in the liquid. Thus, a measurement of d and a knowledge of the
frequency f of the oscillator will enable one to determine the velocity u of propagation of the
ultrasonic wave in the given liquid medium. A thermostatically regulated bath is connected to it
55
Figure 2.2 Ultrasonic interferometer
The following precautions have been taken for the measurement of ultrasonic speed.
(i) To find the least count of the screw head attached to the reflector
(ii) The ultrasonic cell is filled with 3/4th of its capacity with the experimental
sample. Fix the reflector unit on the top of the cell then. Mount the cell in given
sturdy metal base. Connect the output cable from the ultrasonic apparatus to the
(iii) Switch on the ultrasonic apparatus. Keep the adjust and gain knobs in the
minimum position. Just after a minute or so, the meter reading will register a
maximum. Wait for some more time (i.e. about a minute or so). The meter will
56
(iv) Turn the gain knob to a maximum. The reading in the meter may be around 50
or 60 microampere. Now turn the adjust knob so that the meter reading is
around 80 microampere.
(v) Turn the screw gauge head such that the pitch scale reading is the least. In this
Let the screw be turned and the reflector moved up. The meter reading in the
ultrasonic interferometer will change. Note the head scale as well as the pitch
scale reading (on the screw gauge) when the micro ammeter reading is the least.
Measurements of ultrasonic speed with the help of ultrasonic interferometer are based
on finding the wavelength ( l ) in the medium. The plate current is extreme corresponding to the
variation of the reflector distance by half wavelength or integral multiple of half wavelength. The
l
u= f (2.2)
l
d = ( n - 1) (2.3)
2
where d is the total distance moved by the micrometer screw for a maximum or minimum
deflection; n is the number of maxima (or minima) ( 20) of anode current for a distance d.
57
The velocity is given by the relation
2 fd
u= (2.4).
( n - 1)
Thus, the ultrasonic interferometer is a simple device by which the ultrasonic speed in
(i) Sudden rise or fall in temperature of the circulated sample should be avoided to
(ii) The generator should always be switched on after filling the experimental sample
in the cell.
(iii) Generator should be given a time of 15 minutes for warming up before the
observation (Interferometer).
(iv)The experimental sample should be taken out of cell after use and the cell should
(v) Care must be taken to see that the reflector is not touching the bottom of the cell.
(vi)While cleaning the cell, care must be taken not to spoil the gold plating on the
quartz crystal.
58
2.4.2.6. Technical Specifications
1) Model - M-84
3) Measuring Cell
4) Shielded Cable
Length of connecting cable between the generator and the cell is 50 cm.
approximately.
The viscosities of the samples have been measured by using Ubbelohde type
suspended level viscometer (Stokes and Mills, 1965). The viscometer consists of a suspended
59
level arrangement formed by three parallel arms, i.e. receiving, measuring, and auxiliary tubes
(Figure 2.3).
The viscometer has been designed in such a way that the measuring and receiving
tubes have been connected to each other through a bulb D, thus forming Ushape of viscometer.
Two bulbs, namely A and B, one above the other, have been sealed to the measuring tube. The
third arm auxiliary tube has been sealed to the measuring tube through a bulb C. The capillary of
appropriate length and diameter lies in between bulbs B and C. The two marks X and Y, marked
near the bulbs A and B, have been used for recording time.
i) The centers of gravity of the three bulbs A, B and C have been aligned vertically
ii) The resulting flow time for triply distilled water was 466 sec. at 303.15 K.
As the flow time has been greater than 100 sec. the kinetic energy corrections are not necessary
(Pal and Kumar 2004). Special feature of a suspended level viscometer is that the capillary
effects of the two liquid surfaces have been neutralized by each other so that the surface tension
correction for the apparatus is negligible and the transport of momentum is carried out freely
60
AD
X
C
D
The sample solution is taken in the viscometer through the receiving tube. The
volume of the solution in the viscometer should be adequate to avoid any air bubble being
entrapped in the capillary tube while the fiducial bulb is filled. The viscometer containing the
solution is clamped and immersed vertically in the thermostatic water bath and allowed to stand
in it for about 30 minutes to minimize thermal fluctuation. The sample liquid is sucked into the
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bulb A above the fiducial bulb with the help of a rubber tube fitted to the measuring tube.
Necessary care has been taken to allow the solution to stand for sometime in the limb to
compensate the upward force on the solution. Then the solution is allowed to fall under its own
weight by removing the stopper of the tube. The flow time has been measured by a digital stop
watch (Racer, India) capable of registering time accurate to + 0.01 sec. An average of four sets of
flow times for each solution has been taken for the purpose of calculation of the viscosity.
2.4.3.4. Calculation
p r 4 Pt
h= (2.5)
8Vl
P = pressure head
t = time of fall
V = volume taken
l = length of capillary.
The viscosity of the sample solution is obtained using the well-known equation:
h1 r1t1
= (2.6)
h 2 r 2t 2
where h1 and h2 are the viscosities of the sample and water, t1 and t2 are their times of flow, and
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The reproducibility in the viscosity measurements is within
2 10-3 mPas.
2.4.3.5. Precautions
i) The volume of solution in the viscometer should be adequate to avoid any air
bubble being entrapped in the capillary tube while the fiducial bulb is filled.
ii) The viscometer containing the test solution is to be kept in a thermostatic water
All the measurements of density, viscosity, and ultrasonic speed have been made in an
electronically controlled thermostatic water bath (Euro Therm, Mittal Enterprises, India) in order
to maintain a uniform temperature. The bath consists of an immersion heater, a circulating pump,
and a check and contact digital thermal sensor with digital display with a relay to control the
variations in temperature. The samples have been allowed to stand for 30 minutes in thermostatic
water bath to maintain thermal equilibrium with the bath liquid so that temperature becomes
constant. The overall temperature of the test liquids during the measurements is maintained
2.5.1. Specifications
63
Temperature range : -5 C. to 80 C.
The procedure for the measurement of uncertainty is carried out using the format
n
1
q=
n
q
k =1
k (2.7).
n
(
s 2 ( q k ) = (1 / n - 1) j =1 q j - q ) 2
(2.8).
()
s 2 q = s 2 ( qk ) / n (2.9).
The standard uncertainty is estimated by taking square root of the equation (2.9), i.e.
64
( )
u ( xi ) = s X i (2.10).
The uncertainty values in density, ultrasonic speed, and viscosity obtained by the above method
standardized using the evaluation of partial molar volumes, partial molar compressibilities, and
viscosity B coefficients of the amino acids and saccharides, reported in this work, in water at
different temperatures and the estimated values are compared with those reported in literature. A
fair agreement is noticed between the estimated values from our experimental results and the
Table 2.7.1. Density (), Ultrasonic Speed (u), and Viscosity () of Aqueous Solutions
at Different Temperatures
T/K *103 /(kg m-3) u / (m s -1) / (m Pa s)
298.15 0.99564 1496.6 0.8905
303.15 0.99564 1509.4 0.7969
308.15 0.99402 1520.1 0.7190
313.15 0.99220 1529.1 0.6523
Table 2.7.2. Density (), Ultrasonic Speed (u), and Viscosity () of Amino Acids in
Aqueous Solutions at Different Temperatures
*103 /(kg m-3) u / (m s -1) / (m Pa s)
-1
m / (mol kg ) T=298.15 K
Glycine
0.02 0.99768 1497.6 0.8943
0.04 0.99831 1498.5 0.8968
0.06 0.99894 1499.3 0.8998
0.08 0.99956 1500.1 0.9026
65
0.10 1.00018 1500.6 0.9054
= 4.810-4 u =0.620 =2.2410-3
Alanine
0.02 0.99761 1497.9 0.8958
0.04 0.99816 1499.0 0.9003
0.06 0.99870 1500.2 0.9051
0.08 0.99921 1501.3 0.9096
0.10 0.99972 1502.5 0.9139
= 4.110-4 u =0.893 =3.5610-3
Valine
0.02 0.99756 1498.50 0.8905
0.04 0.99805 1500.30 0.8985
0.06 0.99851 1501.90 0.9060
0.08 0.99894 1503.50 0.9137
0.10 0.99934 1505.00 0.9215
= 3.510-4 u =1.28 =5.8510-3
Leucine
0.02 0.99748 1498.9 0.8905
0.04 0.99785 1501.2 0.9000
0.05 0.99813 1502.2 0.9087
0.06 0.99835 1503.2 0.9128
0.08 0.99850 1505.7 0.9174
= 2.310-4 u =1.312 =5.1510-3
T=303.15 K
Glycine
0.02 0.99627 1510.3 0.8000
0.04 0.99689 1511.0 0.8024
0.06 0.99751 1511.4 0.8048
0.08 0.99812 1511.6 0.8072
0.10 0.99873 1511.7 0.8096
= 4.710-4 u =0.365 =1.9110-3
Alanine
0.02 0.99620 1510.7 0.8016
0.04 0.99674 1511.8 0.8057
0.06 0.99725 1513.0 0.8095
0.08 0.99774 1514.2 0.8137
0.10 0.99821 1515.3 0.8175
= 4.010-4 u =0.899 =3.1210-3
Valine
0.02 0.99616 1511.20 0.8039
0.04 0.99666 1513.00 0.8107
0.06 0.99713 1514.60 0.8174
0.08 0.99757 1516.20 0.8242
0.10 0.99799 1517.70 0.8307
= 3.610-4 u =1.269 =5.1610-3
66
Leucine
0.02 0.99607 1511.6 0.8051
0.04 0.99642 1513.8 0.8130
0.05 0.99668 1514.7 0.8168
0.06 0.99686 1515.7 0.8207
0.08 0.99696 1518.0 0.8280
= 2.110-4 u =1.241 =4.5410-3
T=308.15 K
Glycine
0.02 0.99464 1521.0 0.7210
0.04 0.99525 1521.7 0.7234
0.06 0.99586 1522.2 0.7254
0.08 0.99646 1522.5 0.7275
0.10 0.99705 1522.6 0.7294
= 4.610-4 u =0.398 =1.6010-3
Alanine
0.02 0.99457 1521.4 0.7231
0.04 0.99511 1522.6 0.7268
0.06 0.99564 1523.8 0.7301
0.08 0.99616 1525.0 0.7337
0.10 0.99667 1526.2 0.7372
= 4.010-4 u =0.928 =2.7510-3
Valine
0.02 0.99452 1521.90 0.7250
0.04 0.99498 1523.70 0.7314
0.06 0.99538 1525.50 0.7372
0.08 0.99575 1527.30 0.7431
0.10 0.99607 1529.10 0.7490
= 3.110-4 u =1.375 =4.5910-3
Leucine
0.02 0.99444 1522.2 0.7260
0.04 0.99477 1524.4 0.7334
0.05 0.99502 1525.3 0.7368
0.06 0.99516 1526.2 0.7401
0.08 0.99525 1528.4 0.7464
= 1.910-4 u =1.201 =4.0310-3
T=313.15 K
Glycine
0.02 0.99281 1530.0 0.6542
0.04 0.99341 1530.7 0.6561
0.06 0.99401 1531.2 0.6579
0.08 0.99460 1531.5 0.6598
0.10 0.99518 1531.5 0.6616
= 4.610-4 u =0.390 =1.4210-3
Alanine
67
0.02 0.99273 1530.4 0.6554
0.04 0.99325 1531.6 0.6589
0.06 0.99376 1532.9 0.6620
0.08 0.99426 1534.0 0.6650
0.10 0.99475 1535.2 0.6680
= 3.910-4 u =0.930 =2.4110-3
Valine
0.02 0.99269 1530.86 0.6576
0.04 0.99313 1532.50 0.6633
0.06 0.99350 1534.30 0.6687
0.08 0.99382 1536.10 0.6740
0.10 0.99409 1537.90 0.6790
= 2.910-4 u =1.343 =4.1110-3
Leucine
0.02 0.99261 1531.2 0.6584
0.04 0.99294 1533.2 0.6649
0.05 0.99318 1534.1 0.6677
0.06 0.99332 1535.1 0.6706
0.08 0.99338 1537.2 0.6767
= 1.910-4 u =1.171 =3.5610-3
Table 2.7.3. Partial Molal Volumes V0 of Amino Acids in Aqueous Solutions Different
Temperatures
68
Alanine 60.614(0.100) 60.631
Valine 90.718(0.100) 90.981, 90.226
Leucine 108.255(0.065)
T = 308.15 K
Glycine 44.007(0.097) 43.907, 44.268
Alanine 61.540(0.100) 61.418
Valine 91.356(0.100) 91.427
Leucine 108.681(0.076) 108.407
T = 313.15 K
Glycine 44.538(0.097) 44.527
Alanine 62.617(0.100) 62.907
Valine 91.673(0.100) 91.587
Leucine 109.148(0.075) 109.007
1-(Bhat et al., 1985), 2-(Banipal et al., 2004, a), 3-(Sinha et al., 2007), 4-(Sharma et al., 2006),
5-(Kikuchi et al., 1995), 6-(Lark et al., 1983), 7-(Zhao et al., 2006), 8-(Wadi et al., 1997).
Table 2.7.4. Partial Molal Compressibility K0, of -Amino Acids in Aqueous Solutions at
Different Temperatures
69
Valine -20.87(0.115)
Leucine -22.63(0.101)
9-(Soto et al.,1998); 10-(Millero et al., 1978); 11-(Wadi et al., 1997); 12-(Mohanty et al., 1988),
13-(Chalikian et al.,1993).
14-(Daniel et al.,1936); 15-(Lark et al., 2007); 16-(Yan et al., 1999);17-(Banipal et al., 2004, c);
18-(Sandhu et al., 1987); 19-(Islam et al., 2004); 20-(Bhattacharya et al., 1980); 21-(Rajagopal et
70
Table2.7.6. Density (), Ultrasonic speed (u), and Viscosity () of L-Histidine in Aqueous
Solutions at Different Temperatures
303.15 99.305(0.099)
71
308.15 99.753(0.097) 99.90022
313.15 100.336(0.099) 100.40022
Parenthesis indicates standard error in V0.
Table 2.7.10. Density(), Ultrasonic speed (u), and Viscosity () of Fructose in Aqueous
Solutions at Different Temperatures
72
T=303.15 K
0.05 0.99907 1512.3 0.8146
0.10 1.00251 1514.6 0.8314
0.15 1.00596 1516.2 0.8480
0.20 1.00941 1517.2 0.8638
T=308.15 K
0.05 0.99741 1522.9 0.7344
0.10 1.00081 1525.1 0.7495
0.15 1.00423 1526.5 0.7641
0.20 1.00764 1527.3 0.7781
T=313.15 K
0.05 0.99555 1531.8 0.6660
0.10 0.99891 1533.8 0.6794
0.15 1.00229 1535.1 0.6924
0.20 1.00567 1535.7 0.7048
73
Table 2.7.13. Viscosity B-Coefficients (B) Fructose in Aqueous Solutions at Different
Temperatures
Table 2.7.14. Density(), Ultrasonic Speed (u), and Viscosity () of Xylose in Aqueous
Solutions at Different Temperatures
*103 / (kg m-3) u / (m s -1) / (m Pa s)
ms/ (mol kg-1)
T=298.15 K
0.05 0.99976 1499.1 0.9054
0.10 1.00245 1501.5 0.9212
0.15 1.00511 1503.9 0.9352
0.20 1.00774 1506.0 0.9495
T=303.15 K
0.05 0.99834 1511.8 0.8095
0.10 1.00100 1514.0 0.8235
0.15 1.00363 1516.0 0.8363
0.20 1.00622 1517.7 0.8480
T=308.15 K
0.05 0.99670 1522.5 0.7300
0.10 0.99934 1524.8 0.7426
0.15 1.00193 1526.9 0.7539
0.20 1.00448 1528.9 0.7640
T=313.15 K
0.05 0.99486 1531.5 0.6631
0.10 0.99747 1533.8 0.6729
0.15 1.00005 1536.0 0.6833
0.20 1.00258 1538.1 0.6932
Table 2.7.15. Partial Molal Volumes (V0) of Xylose in Aqueous Solutions at Different
Temperatures
74
298.15 95.54 95.4736, 95.6037
303.15 95.95
308.15 96.32 96.3238
313.15 96.85 97.3039
36-(Zhuo et al., 2006); 37-(Jasra et al., 1982); 38-(Zhang et al., 2006); 39-(Paljk et al., 1990)
75